RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA493244", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
456893 456893 PRJNA493244_P_NODE_351761_length_901_cov_1.863095_g334759_i0 PRJNA493244 351761 901 1.863095 16.78648595 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 109 4.46e-25   NR MCX6737075.1 2762014 g334759 i0 37.4 1.24528301886792 187 87 54.3 6 9 497 5 185 MCX6737075.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 1122 109 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29318456 29318456 PRJNA493244_P_NODE_1385209_length_272_cov_2.426540_g1362084_i0 PRJNA493244 1385209 272 2.42654 6.6001888 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 103 2.87e-26   NR RJQ25152.1 2762014 g1362084 i0 94.2 0.573529411764706 52 3 57.4 0 110 265 26 77 RJQ25152.1 MAG: resolvase [Candidatus Parcubacteria bacterium] diamond 156 103 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;