RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492406", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA492406 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28718665 28718665 PRJNA492406_P_NODE_27567_length_249_cov_1.215909_g27268_i0 PRJNA492406 27567 249 1.215909 3.02761341 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 94 5.930000000000001e-21   NR HXF90670.1 2507556 g27268 i0 59.5 0.891566265060241 74 29 89.2 1 245 24 81 153 HXF90670.1 hypothetical protein [Candidatus Nitrosotenuis sp.] diamond 222 94 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
32542763 32542763 PRJNA492406_P_NODE_22539_length_271_cov_1.247475_g22240_i0 PRJNA492406 22539 271 1.247475 3.38065725 Nitrosopumilus sp. 2024843 Archaea Archaea 61.6 1.19e-8   NR MBA4717734.1 2024843 g22240 i0 67.4 0.974169741697417 43 14 47.6 0 234 106 37 79 MBA4717734.1 SBBP repeat-containing protein [Nitrosopumilus sp.] diamond 264 61.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;