contig_metadata
11 rows where bioproject = "PRJNA492406", tax_phylum = "Mycoplasmatota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 452632 | 452632 | PRJNA492406_P_NODE_26721_length_251_cov_0.865169_g26422_i0 | PRJNA492406 | 26721 | 251 | 0.865169 | 2.17157419 | Mycoplasma cottewii | 51364 | Bacteria | Bacteria | 370 | 5.53e-98 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g26422 | i0 | 93.227 | 1.9003984063745 | 251 | 17 | 100 | 0 | 1 | 251 | 722801 | 722551 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 477 | 370 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 8106005 | 8106005 | PRJNA492406_P_NODE_9467_length_399_cov_0.944785_g9168_i0 | PRJNA492406 | 9467 | 399 | 0.944785 | 3.76969215 | Mycoplasma cottewii | 51364 | Bacteria | Bacteria | 206 | 2.7699999999999996e-48 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g9168 | i0 | 85.5 | 21.1052631578947 | 200 | 25 | 50 | 4 | 171 | 368 | 473674 | 473871 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 8421 | 206 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 8752228 | 8752228 | PRJNA492406_P_NODE_32527_length_234_cov_2.782609_g32228_i0 | PRJNA492406 | 32527 | 234 | 2.782609 | 6.51130506 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 420 | 4.99e-113 | NTclustered | gi|2065475|gb|U35016.1|MHU35016 | 2100 | g32228 | i0 | 100 | 15.8333333333333 | 227 | 0 | 97 | 0 | 1 | 227 | 1318 | 1544 | Mycoplasma hyorhinis VlpD prolipoprotein (vlpD), VlpE prolipoprotein (vlpE), VlpF prolipoprotein (vlpF) genes, complete cds | blastn | 3705 | 420 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 10656293 | 10656293 | PRJNA492406_P_NODE_26709_length_251_cov_0.865169_g26410_i0 | PRJNA492406 | 26709 | 251 | 0.865169 | 2.17157419 | Tenericutes bacterium MO-XQ | 1911684 | Bacteria | Bacteria | 58.4 | 4.89e-4 | NTclustered | gi|1307784757|gb|CP017948.1| | 1911684 | g26410 | i0 | 100 | 3.07171314741036 | 31 | 0 | 12 | 0 | 221 | 251 | 2036513 | 2036543 | Tenericutes bacterium MO-XQ chromosome, complete sequence | blastn | 771 | 58.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Tenericutes bacterium MO-XQ | ||||||
| 13206369 | 13206369 | PRJNA492406_P_NODE_29511_length_246_cov_0.884393_g29212_i0 | PRJNA492406 | 29511 | 246 | 0.884393 | 2.17560678 | Mycoplasma cottewii | 51364 | Bacteria | Bacteria | 422 | 1.47e-113 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g29212 | i0 | 97.561 | 72.5609756097561 | 246 | 6 | 100 | 0 | 1 | 246 | 137375 | 137130 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 17850 | 422 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 17029853 | 17029853 | PRJNA492406_P_NODE_26274_length_252_cov_1.290503_g25975_i0 | PRJNA492406 | 26274 | 252 | 1.290503 | 3.25206756 | Mycoplasma yeatsii | 51365 | Bacteria | Bacteria | 460 | 3.2e-125 | NTclustered | gi|756767228|gb|CP007520.1| | 743967 | g25975 | i0 | 99.603 | 91.6785714285714 | 252 | 1 | 100 | 0 | 1 | 252 | 529433 | 529684 | Mycoplasma yeatsii GM274B | blastn | 23103 | 460 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma yeatsii | ||
| 17676967 | 17676967 | PRJNA492406_P_NODE_32374_length_238_cov_2.169697_g32075_i0 | PRJNA492406 | 32374 | 238 | 2.169697 | 5.16387886 | Mycoplasma | 2093 | Bacteria | Bacteria | 429 | 8.45e-116 | NTclustered | gi|54609775|gb|AY765214.1| | 51364 | g32075 | i0 | 99.16 | 195.659663865546 | 238 | 2 | 100 | 0 | 1 | 238 | 490 | 253 | Mycoplasma cottewii strain ATCC 43093 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 46567 | 429 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 18950810 | 18950810 | PRJNA492406_P_NODE_29715_length_245_cov_1.343023_g29416_i0 | PRJNA492406 | 29715 | 245 | 1.343023 | 3.29040635 | Mycoplasma | 2093 | Bacteria | Bacteria | 435 | 1.88e-117 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g29416 | i0 | 98.77 | 12.3102040816327 | 244 | 3 | 99 | 0 | 2 | 245 | 903520 | 903763 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 3016 | 435 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 19578433 | 19578433 | PRJNA492406_P_NODE_27576_length_249_cov_1.096591_g27277_i0 | PRJNA492406 | 27576 | 249 | 1.096591 | 2.73051159 | Mycoplasma yeatsii | 51365 | Bacteria | Bacteria | 433 | 6.89e-117 | NTclustered | gi|756767228|gb|CP007520.1| | 743967 | g27277 | i0 | 97.992 | 97.5502008032128 | 249 | 5 | 100 | 0 | 1 | 249 | 135874 | 136122 | Mycoplasma yeatsii GM274B | blastn | 24290 | 433 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma yeatsii | ||
| 22776389 | 22776389 | PRJNA492406_P_NODE_5858_length_495_cov_19.251185_g5559_i0 | PRJNA492406 | 5858 | 495 | 19.251185 | 95.29336575 | Bacteria | 2 | Bacteria | Bacteria | 904 | 0 | NTclustered | gi|365822471|gb|JN935874.1| | 51364 | g5559 | i0 | 99.596 | 173.80202020202 | 495 | 2 | 100 | 0 | 1 | 495 | 922 | 1416 | Mycoplasma cottewii strain VIS 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 86032 | 904 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 24678603 | 24678603 | PRJNA492406_P_NODE_26760_length_251_cov_0.865169_g26461_i0 | PRJNA492406 | 26760 | 251 | 0.865169 | 2.17157419 | Mycoplasma cottewii | 51364 | Bacteria | Bacteria | 436 | 5.369999999999999e-118 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g26461 | i0 | 98.008 | 24.3386454183267 | 251 | 5 | 100 | 0 | 1 | 251 | 324597 | 324847 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 6109 | 436 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;