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contig_metadata

11 rows where bioproject = "PRJNA492406", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 11 ✖

tax_kingdom 1

  • Pseudomonadati · 11 ✖

bioproject 1

  • PRJNA492406 · 11 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9380142 9380142 PRJNA492406_P_NODE_13448_length_341_cov_2.783582_g13149_i0 PRJNA492406 13448 341 2.783582 9.49201462 PVC group 1783257 Bacteria Bacteria 159 6.74e-44   NR PLX74580.1 892 g13149 i0 67 43.4076246334311 112 33 98.5 1 340 5 367 474 PLX74580.1 MAG: adenosylhomocysteinase [Desulfuromonas sp.] diamond 14802 159 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp.
15754940 15754940 PRJNA492406_P_NODE_15833_length_315_cov_1.871901_g15534_i0 PRJNA492406 15833 315 1.871901 5.89648815 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 173 2.26e-53   NR GJM17621.1 2202153 g15534 i0 83.8 0.942857142857143 99 16 94.3 0 299 3 1 99 GJM17621.1 MAG: hypothetical protein DHS20C13_29480 [Thermodesulfobacteriota bacterium] diamond 297 173 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
18304103 18304103 PRJNA492406_P_NODE_22195_length_273_cov_0.925000_g21896_i0 PRJNA492406 22195 273 0.925 2.52525 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 162 4.25e-49   NR GJM17675.1 2202153 g21896 i0 86.5 8.89010989010989 89 12 97.8 0 272 6 67 155 GJM17675.1 MAG: hypothetical protein DHS20C13_30020 [Thermodesulfobacteriota bacterium] diamond 2427 162 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27613671 27613671 PRJNA492406_P_NODE_28344_length_248_cov_0.880000_g28045_i0 PRJNA492406 28344 248 0.88 2.1824 Desulfobacterales bacterium 2044940 Bacteria Bacteria 45.8 0.00309   NR HHC24909.1 2044940 g28045 i0 35.8 0.810483870967742 67 43 81 0 43 243 97 163 HHC24909.1 DUF4388 domain-containing protein [Desulfobacterales bacterium] diamond 201 45.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
28213160 28213160 PRJNA492406_P_NODE_4546_length_561_cov_1.735656_g4251_i0 PRJNA492406 4546 561 1.735656 9.73703016 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 47 0.0119   NR GJM17643.1 2202153 g4251 i0 32.9 0.422459893048128 79 52 41.7 1 398 165 135 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 237 47 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29034577 29034577 PRJNA492406_P_NODE_24808_length_259_cov_2.440860_g24509_i0 PRJNA492406 24808 259 2.44086 6.3218274 Desulfobacula sp. 2593537 Bacteria Bacteria 59.7 4.82e-8   NR NJM01828.1 2593537 g24509 i0 40.3 4.87644787644788 72 36 83.4 1 216 1 435 499 NJM01828.1 response regulator [Desulfobacula sp.] diamond 1263 59.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacula Desulfobacula sp.
29918580 29918580 PRJNA492406_P_NODE_10591_length_379_cov_2.003268_g10292_i0 PRJNA492406 10591 379 2.003268 7.59238572 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 48.1 0.00158   NR NLZ17542.1 2053307 g10292 i0 51.2 0.66490765171504 41 20 32.5 0 325 203 186 226 NLZ17542.1 CAP domain-containing protein [Desulfobulbaceae bacterium] diamond 252 48.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
31087480 31087480 PRJNA492406_P_NODE_8275_length_424_cov_1.270655_g7976_i0 PRJNA492406 8275 424 1.270655 5.3875772 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 96.3 5.43e-20   NR MFC1516347.1 2202153 g7976 i0 45.9 0.955188679245283 135 65 94.1 6 400 2 170 298 MFC1516347.1 SMP-30/gluconolactonase/LRE family protein [Thermodesulfobacteriota bacterium] diamond 405 96.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31435153 31435153 PRJNA492406_P_NODE_10576_length_379_cov_2.849673_g10277_i0 PRJNA492406 10576 379 2.849673 10.80026067 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 45.4 0.0128   NR HKQ33371.1 2202153 g10277 i0 34.3 1.77308707124011 105 61 81.5 4 9 317 113 211 HKQ33371.1 DUF4203 domain-containing protein [Thermodesulfobacteriota bacterium] diamond 672 45.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32352990 32352990 PRJNA492406_P_NODE_31119_length_243_cov_0.905882_g30820_i0 PRJNA492406 31119 243 0.905882 2.20129326 Desulfovibrio legallii 571438 Bacteria Bacteria 89.4 1.89e-19   NR WP_270229345.1 571438 g30820 i0 54.2 0.888888888888889 72 33 88.9 0 23 238 53 124 WP_270229345.1 class I SAM-dependent methyltransferase [Desulfovibrio legallii] diamond 216 89.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio legallii
32574435 32574435 PRJNA492406_P_NODE_28539_length_247_cov_1.551724_g28240_i0 PRJNA492406 28539 247 1.551724 3.83275828 Halodesulfovibrio spirochaetisodalis 1560234 Bacteria Bacteria 69.7 1.94e-13   NR WP_066856293.1 1560234 g28240 i0 50 0.874493927125506 72 36 87.4 0 247 32 4 75 WP_066856293.1 RNA recognition motif domain-containing protein [Halodesulfovibrio spirochaetisodalis] diamond 216 69.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Halodesulfovibrio Halodesulfovibrio spirochaetisodalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;