RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492406", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA492406 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13205944 13205944 PRJNA492406_P_NODE_11191_length_370_cov_4.299663_g10892_i0 PRJNA492406 11191 370 4.299663 15.9087531 Zebrafish picornavirus 1 2304617 Viruses Viruses 634 2.75e-177   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g10892 i0 97.568 3 370 9 100 0 1 370 6833 6464 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1110 634 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
30107912 30107912 PRJNA492406_P_NODE_20352_length_282_cov_1.210526_g20053_i0 PRJNA492406 20352 282 1.210526 3.41368332 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 156 8.539999999999997e-42   NR AVM87439.1 3063761 g20053 i0 79.6 0.98936170212766 93 19 98.9 0 282 4 1209 1301 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 279 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;