RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA492406", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA492406 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20854028 20854028 PRJNA492406_P_NODE_1777_length_914_cov_7.487515_g1529_i0 PRJNA492406 1777 914 7.487515 68.4358871 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 512 3.5199999999999997e-140   NTclustered gi|2522768008|gb|OR162445.1| 646526 g1529 i0 85.979 4.34901531728665 485 60 88 8 176 657 3012 2533 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3975 512 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
23404542 23404542 PRJNA492406_P_NODE_11959_length_359_cov_3.311189_g11660_i0 PRJNA492406 11959 359 3.311189 11.88716851 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 97.1 1.55e-15   NTclustered gi|448278458|gb|KC137554.1| 1289055 g11660 i0 82.727 0.306406685236769 110 18 31 1 202 311 2962 2854 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 110 97.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
32888859 32888859 PRJNA492406_P_NODE_26000_length_253_cov_2.122222_g25701_i0 PRJNA492406 26000 253 2.122222 5.36922166 Tubulinosema ratisbonensis 291195 Fungi Fungi 75.9 9.23e-14   NR RVD90501.1 291195 g25701 i0 48.6 0.877470355731225 74 38 87.7 0 222 1 270 343 RVD90501.1 hypothetical protein TUBRATIS_31610 [Tubulinosema ratisbonensis] diamond 222 75.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;