RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA492406", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA492406 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26855155 26855155 PRJNA492406_P_NODE_18281_length_291_cov_2.009174_g17982_i0 PRJNA492406 18281 291 2.009174 5.84669634 Paraphysoderma sedebokerense 1500003 Fungi Fungi 67 1.97e-10   NR KAI9139437.1 1500003 g17982 i0 41.5 5.30927835051546 94 51 96.9 2 288 7 288 377 KAI9139437.1 peptidase family M41-domain-containing protein, partial [Paraphysoderma sedebokerense] diamond 1545 67 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
26918262 26918262 PRJNA492406_P_NODE_31642_length_242_cov_0.911243_g31343_i0 PRJNA492406 31642 242 0.911243 2.20520806 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 69.7 1.04e-11   NR KAI9168192.1 1313167 g31343 i0 58.8 7.88429752066116 80 27 97.9 3 242 6 315 389 KAI9168192.1 hypothetical protein H9P43_007564 [Blastocladiella emersonii ATCC 22665] diamond 1908 69.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
29081992 29081992 PRJNA492406_P_NODE_20768_length_280_cov_0.951691_g20469_i0 PRJNA492406 20768 280 0.951691 2.6647348 Eukaryota 2759 Fungi Fungi 53.1 1.21e-5   NR ORZ34380.1 765915 g20469 i0 37.4 3.58928571428571 91 54 94.3 1 275 12 145 235 ORZ34380.1 proteasome regulatory subunit C-terminal-domain-containing protein, partial [Catenaria anguillulae PL171] diamond 1005 53.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
30392832 30392832 PRJNA492406_P_NODE_32533_length_234_cov_2.596273_g32234_i0 PRJNA492406 32533 234 2.596273 6.07527882 Coelomomyces lativittatus 945690 Fungi Fungi 45.8 0.0028   NR KAJ1505895.1 945690 g32234 i0 39.7 1.65384615384615 63 38 80.8 0 43 231 29 91 KAJ1505895.1 hypothetical protein HMI56_000882 [Coelomomyces lativittatus] diamond 387 45.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
32527215 32527215 PRJNA492406_P_NODE_26139_length_252_cov_3.357542_g25840_i0 PRJNA492406 26139 252 3.357542 8.46100584 Fungi 4751 Fungi Fungi 100 2.8e-25   NR KAI9221418.1 64508 g25840 i0 58.8 11.1428571428571 80 33 95.2 0 1 240 31 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 2808 100 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
32574418 32574418 PRJNA492406_P_NODE_17199_length_301_cov_1.754386_g16900_i0 PRJNA492406 17199 301 1.754386 5.28070186 Catenaria anguillulae PL171 765915 Fungi Fungi 94.7 1.82e-22   NR ORZ39709.1 765915 g16900 i0 50 0.916943521594684 92 46 91.7 0 277 2 6 97 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 276 94.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;