RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA492406" and tax_kingdom = "Bamfordvirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA492406 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8752159 8752159 PRJNA492406_P_NODE_22367_length_272_cov_1.160804_g22068_i0 PRJNA492406 22367 272 1.160804 3.15738688 root 1 Root_unresolved Root_unresolved 503 5.729999999999998e-138   NTclustered gi|2288721861|gb|OP218818.1| 10535 g22068 i0 100 99.7022058823529 272 0 100 0 1 272 2196 1925 Unidentified adenovirus strain CHOP Ad5 blastn 27119 503 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
29887013 29887013 PRJNA492406_P_NODE_6071_length_487_cov_1.164251_g5772_i0 PRJNA492406 6071 487 1.164251 5.66990237 Homavirus sp. 2487769 Viruses Viruses 234 4.73e-74   NR AYV82419.1 2487769 g5772 i0 66.9 0.985626283367556 160 52 97.9 1 477 1 3 162 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 480 234 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.
30866220 30866220 PRJNA492406_P_NODE_14054_length_334_cov_1.915709_g13755_i0 PRJNA492406 14054 334 1.915709 6.39846806 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 87.4 2.13e-17   NR CAK7596649.1 3072188 g13755 i0 58.6 0.62874251497006 70 29 62.9 0 333 124 406 475 CAK7596649.1 Transposase [Catovirus sp. 'naegleriensis'] diamond 210 87.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;