RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA492406", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA492406 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6202491 6202491 PRJNA492406_P_NODE_4045_length_597_cov_1.950382_g3752_i0 PRJNA492406 4045 597 1.950382 11.64378054 Fimbriimonas 1005038 Bacteria Bacteria 928 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g3752 i0 94.79 280.268006700168 595 31 99 0 1 595 28511 29105 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 167320 928 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
14481449 14481449 PRJNA492406_P_NODE_7892_length_432_cov_1.610028_g7593_i0 PRJNA492406 7892 432 1.610028 6.95532096 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 172 3.07e-38   NTclustered gi|2874253689|emb|OY969415.1| 157466 g7593 i0 82.587 33.8680555555556 201 29 46 6 222 419 3914811 3915008 MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 blastn 14631 172 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
26886782 26886782 PRJNA492406_P_NODE_27181_length_250_cov_0.870056_g26882_i0 PRJNA492406 27181 250 0.870056 2.17514 Capsulimonadales bacterium 2971800 Bacteria Bacteria 75.5 1.01e-13   NR MDX1934713.1 2971800 g26882 i0 44.6 0.996 83 15 99.6 1 2 250 36 87 MDX1934713.1 A/G-specific adenine glycosylase [Capsulimonadales bacterium] diamond 249 75.5 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
30029338 30029338 PRJNA492406_P_NODE_19151_length_287_cov_1.780374_g18852_i0 PRJNA492406 19151 287 1.780374 5.10967338 Bacillati 1783272 Bacteria Bacteria 61.2 9.19e-10   NR HEY3413817.1 2033014 g18852 i0 38.5 3.6794425087108 91 50 89.9 2 6 263 3 92 HEY3413817.1 stage V sporulation protein S [Armatimonadota bacterium] diamond 1056 61.6 0.993506493506494 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;