RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492406", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA492406 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30107922 30107922 PRJNA492406_P_NODE_27852_length_249_cov_0.875000_g27553_i0 PRJNA492406 27852 249 0.875 2.17875 Giardia lamblia P15 658858 Fornicata other_Eukaryota 47 0.00125   NR EFO60818.1 658858 g27553 i0 34 0.602409638554217 50 33 60.2 0 202 53 441 490 EFO60818.1 High cysteine membrane protein Group 6 [Giardia lamblia P15] diamond 150 47 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
31719920 31719920 PRJNA492406_P_NODE_27557_length_249_cov_1.278409_g27258_i0 PRJNA492406 27557 249 1.278409 3.18323841 Kipferlia bialata 797122 Fornicata other_Eukaryota 52.8 6.82e-6   NR GIQ80105.1 797122 g27258 i0 46.8 0.566265060240964 47 25 56.6 0 3 143 159 205 GIQ80105.1 hypothetical protein KIPB_000851 [Kipferlia bialata] diamond 141 52.8 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;