RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA492406", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Blackallbacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Blackallbacteria · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA492406 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26981469 26981469 PRJNA492406_P_NODE_31382_length_242_cov_0.911243_g31083_i0 PRJNA492406 31382 242 0.911243 2.20520806 bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_5 2014262 Bacteria Bacteria 130 3.45e-34   NR PIQ24546.1 2014262 g31083 i0 83.8 1.98347107438017 80 13 99.2 0 241 2 60 139 PIQ24546.1 MAG: ADP-forming succinate--CoA ligase subunit beta [bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26] diamond 480 130 1 Bacteria Bacteria candidate phyla   Candidatus Blackallbacteria         bacterium (Candidatus Blackallbacteria) CG18_big_fil_WC_8_21_14_2_50_49_26

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;