RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA492363" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA492363 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25566829 25566829 PRJNA492363_S_NODE_74633_length_220_cov_1.654088_g73812_i0 PRJNA492363 74633 220 1.654088 3.6389936 Gallid alphaherpesvirus 1 10386 Viruses Viruses 104 5.3e-18   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g73812 i0 100 215.422727272727 56 0 25 0 165 220 139665 139720 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 47393 104 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
25838902 25838902 PRJNA492363_S_NODE_65339_length_226_cov_0.806061_g64518_i0 PRJNA492363 65339 226 0.806061 1.82169786 Gallid alphaherpesvirus 1 10386 Viruses Viruses 71.3 5.55e-8   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g64518 i0 100 180.225663716814 38 0 17 0 189 226 139668 139705 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 40731 71.3 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
26169794 26169794 PRJNA492363_S_NODE_98645_length_202_cov_1.964539_g97824_i0 PRJNA492363 98645 202 1.964539 3.96836878 root 1 Root_unresolved Root_unresolved 84.2 6.24e-12   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g97824 i0 97.917 217.128712871287 48 1 24 0 1 48 139715 139668 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 43860 84.2 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;