RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492363", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA492363 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32986730 32986730 PRJNA492363_S_NODE_87899_length_208_cov_1.306122_g87078_i0 PRJNA492363 87899 208 1.306122 2.71673376 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 134 2.65e-36   NR HJY14496.1 2169593 g87078 i0 91.3 0.995192307692308 69 6 99.5 0 1 207 181 249 HJY14496.1 PQQ-binding-like beta-propeller repeat protein [Nitrososphaeraceae archaeon] diamond 207 134 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33037735 33037735 PRJNA492363_S_NODE_36972_length_238_cov_1.310734_g36151_i0 PRJNA492363 36972 238 1.310734 3.11954692 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 80.1 3.16e-16   NR HWY35014.1 2202732 g36151 i0 47.4 1.97899159663866 78 41 98.3 0 1 234 111 188 HWY35014.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 471 80.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;