contig_metadata
20 rows where bioproject = "PRJNA492363", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25567341 | 25567341 | PRJNA492363_S_NODE_97017_length_203_cov_0.901408_g96196_i0 | PRJNA492363 | 97017 | 203 | 0.901408 | 1.82985824 | Anaeromyxobacter sp. Fw1 | 1872521 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|152026452|gb|CP000769.1| | 404589 | g96196 | i0 | 100 | 0.137931034482759 | 28 | 0 | 14 | 0 | 115 | 142 | 4005725 | 4005698 | Anaeromyxobacter sp. Fw109-5, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 | ||
| 25761184 | 25761184 | PRJNA492363_S_NODE_10778_length_294_cov_3.605150_g9957_i0 | PRJNA492363 | 10778 | 294 | 3.60515 | 10.599141 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 96.3 | 1.06e-20 | NR | MBW2185913.1 | 2026735 | g9957 | i0 | 58 | 0.826530612244898 | 81 | 34 | 82.7 | 0 | 250 | 8 | 266 | 346 | MBW2185913.1 DEAD/DEAH box helicase family protein [Deltaproteobacteria bacterium] | diamond | 243 | 96.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 25838396 | 25838396 | PRJNA492363_S_NODE_291_length_26721_cov_34.699812_g23_i17 | PRJNA492363 | 291 | 26721 | 34.699812 | 9272.13676452 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 2183 | 0 | NR | WP_395850126.1 | 43 | g23 | i17 | 57 | 0.234646906927136 | 2090 | 868 | 23.3 | 16 | 19581 | 13354 | 6 | 2079 | WP_395850126.1 AAA domain-containing protein [Cystobacter fuscus] | diamond | 6270 | 2183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 25839121 | 25839121 | PRJNA492363_S_NODE_77827_length_217_cov_2.051282_g77006_i0 | PRJNA492363 | 77827 | 217 | 2.051282 | 4.45128194 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 93.6 | 5.050000000000001e-21 | NR | HSY20712.1 | 2268199 | g77006 | i0 | 67.2 | 0.80184331797235 | 58 | 19 | 80.2 | 0 | 43 | 216 | 124 | 181 | HSY20712.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 174 | 93.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 25974160 | 25974160 | PRJNA492363_S_NODE_118716_length_182_cov_4.206612_g117895_i0 | PRJNA492363 | 118716 | 182 | 4.206612 | 7.65603384 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g117895 | i0 | 100 | 0.164835164835165 | 30 | 0 | 16 | 0 | 3 | 32 | 6904058 | 6904087 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 26110394 | 26110394 | PRJNA492363_S_NODE_14845_length_260_cov_1.286432_g14024_i0 | PRJNA492363 | 14845 | 260 | 1.286432 | 3.3447232 | Sorangium aterium | 2995308 | Bacteria | Bacteria | 105 | 1.35e-25 | NR | WP_272095245.1 | 2995308 | g14024 | i0 | 72.4 | 0.876923076923077 | 76 | 21 | 87.7 | 0 | 3 | 230 | 90 | 165 | WP_272095245.1 SDR family oxidoreductase [Sorangium aterium] | diamond | 228 | 105 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium atrum | |||
| 26111321 | 26111321 | PRJNA492363_S_NODE_75845_length_219_cov_1.778481_g75024_i0 | PRJNA492363 | 75845 | 219 | 1.778481 | 3.89487339 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 95.5 | 4.17e-22 | NR | MEZ4441985.1 | 2268199 | g75024 | i0 | 76.3 | 2.42465753424658 | 59 | 14 | 80.8 | 0 | 180 | 4 | 70 | 128 | MEZ4441985.1 response regulator transcription factor [Polyangiaceae bacterium] | diamond | 531 | 95.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 26382040 | 26382040 | PRJNA492363_S_NODE_10719_length_295_cov_2.119658_g9898_i0 | PRJNA492363 | 10719 | 295 | 2.119658 | 6.2529911 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 157 | 1.89e-44 | NR | MEO8530427.1 | 2026735 | g9898 | i0 | 88.2 | 6.03050847457627 | 85 | 10 | 86.4 | 0 | 39 | 293 | 19 | 103 | MEO8530427.1 efflux RND transporter permease subunit [Deltaproteobacteria bacterium] | diamond | 1779 | 157 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 26382542 | 26382542 | PRJNA492363_S_NODE_22263_length_246_cov_0.897297_g21442_i0 | PRJNA492363 | 22263 | 246 | 0.897297 | 2.20735062 | Archangium violaceum | 83451 | Bacteria | Bacteria | 239 | 1.59e-58 | NTclustered | gi|2619762464|gb|CP137851.1| | 83451 | g21442 | i0 | 88.442 | 61.8170731707317 | 199 | 21 | 80 | 2 | 1 | 197 | 2939685 | 2939883 | Archangium violaceum strain KYC5002 chromosome, complete genome | blastn | 15207 | 239 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 26383908 | 26383908 | PRJNA492363_S_NODE_98983_length_202_cov_0.907801_g98162_i0 | PRJNA492363 | 98983 | 202 | 0.907801 | 1.83375802 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 69.4 | 1.75e-7 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g98162 | i0 | 93.478 | 1.18316831683168 | 46 | 3 | 23 | 0 | 38 | 83 | 240106 | 240061 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 239 | 69.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 32935324 | 32935324 | PRJNA492363_S_NODE_80673_length_213_cov_1.013158_g79852_i0 | PRJNA492363 | 80673 | 213 | 1.013158 | 2.15802654 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 86.3 | 1.68e-18 | NR | RYF11695.1 | 2026735 | g79852 | i0 | 62.3 | 2.91549295774648 | 69 | 26 | 97.2 | 0 | 207 | 1 | 48 | 116 | RYF11695.1 MAG: conjugal transfer protein TraG, partial [Deltaproteobacteria bacterium] | diamond | 621 | 86.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32952504 | 32952504 | PRJNA492363_S_NODE_29874_length_241_cov_1.655556_g29053_i0 | PRJNA492363 | 29874 | 241 | 1.655556 | 3.98988996 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 110 | 3.5100000000000004e-26 | NR | HEX2659345.1 | 3058050 | g29053 | i0 | 74.7 | 0.983402489626556 | 79 | 20 | 98.3 | 0 | 239 | 3 | 205 | 283 | HEX2659345.1 ATP-binding protein [Polyangia bacterium] | diamond | 237 | 110 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 32958570 | 32958570 | PRJNA492363_S_NODE_36946_length_238_cov_1.446328_g36125_i0 | PRJNA492363 | 36946 | 238 | 1.446328 | 3.44226064 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 56.2 | 6.2e-7 | NR | HAC79009.1 | 2026735 | g36125 | i0 | 38.5 | 3.95798319327731 | 78 | 48 | 98.3 | 0 | 4 | 237 | 488 | 565 | HAC79009.1 selenide, water dikinase SelD [Deltaproteobacteria bacterium] | diamond | 942 | 56.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 33020786 | 33020786 | PRJNA492363_S_NODE_97060_length_203_cov_0.901408_g96239_i0 | PRJNA492363 | 97060 | 203 | 0.901408 | 1.82985824 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 102 | 3.0099999999999997e-25 | NR | MCO6429828.1 | 2026735 | g96239 | i0 | 71.6 | 0.990147783251232 | 67 | 19 | 99 | 0 | 203 | 3 | 76 | 142 | MCO6429828.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 201 | 102 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 33060779 | 33060779 | PRJNA492363_S_NODE_71797_length_222_cov_1.192547_g70976_i0 | PRJNA492363 | 71797 | 222 | 1.192547 | 2.64745434 | Bacteria | 2 | Bacteria | Bacteria | 130 | 8.67e-34 | NR | MBM4342416.1 | 2026735 | g70976 | i0 | 78.1 | 5.94594594594595 | 73 | 16 | 98.6 | 0 | 222 | 4 | 22 | 94 | MBM4342416.1 urate hydroxylase PuuD [Deltaproteobacteria bacterium] | diamond | 1320 | 130 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 33089012 | 33089012 | PRJNA492363_S_NODE_76886_length_218_cov_1.847134_g76065_i0 | PRJNA492363 | 76886 | 218 | 1.847134 | 4.02675212 | unclassified Myxococcus | 2648731 | Bacteria | Bacteria | 54.3 | 2.26e-6 | NR | WP_223748907.1 | 2648731 | g76065 | i0 | 41.7 | 0.990825688073395 | 72 | 40 | 99.1 | 1 | 218 | 3 | 179 | 248 | WP_223748907.1 MULTISPECIES: SBBP repeat-containing protein [unclassified Myxococcus] | diamond | 216 | 54.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | |||
| 33089049 | 33089049 | PRJNA492363_S_NODE_86190_length_209_cov_0.864865_g85369_i0 | PRJNA492363 | 86190 | 209 | 0.864865 | 1.80756785 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 144 | 5.93e-42 | NR | HPH70612.1 | 2212474 | g85369 | i0 | 97.1 | 0.976076555023923 | 68 | 2 | 97.6 | 0 | 6 | 209 | 1 | 68 | HPH70612.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 204 | 144 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 33089092 | 33089092 | PRJNA492363_S_NODE_95054_length_204_cov_1.342657_g94233_i0 | PRJNA492363 | 95054 | 204 | 1.342657 | 2.73902028 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 57 | 2.03e-7 | NR | MBL8976201.1 | 2026763 | g94233 | i0 | 44.4 | 1.05882352941176 | 72 | 31 | 92.6 | 1 | 194 | 6 | 386 | 457 | MBL8976201.1 bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase [Myxococcales bacterium] | diamond | 216 | 57 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 33129163 | 33129163 | PRJNA492363_S_NODE_79223_length_215_cov_1.896104_g78402_i0 | PRJNA492363 | 79223 | 215 | 1.896104 | 4.0766236 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 74.7 | 4.2e-14 | NR | MBS2021741.1 | 2026735 | g78402 | i0 | 78.3 | 1.93953488372093 | 46 | 10 | 64.2 | 0 | 50 | 187 | 27 | 72 | MBS2021741.1 site-specific DNA-methyltransferase [Deltaproteobacteria bacterium] | diamond | 417 | 75.1 | 0.994673768308922 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 33140150 | 33140150 | PRJNA492363_S_NODE_87887_length_208_cov_1.306122_g87066_i0 | PRJNA492363 | 87887 | 208 | 1.306122 | 2.71673376 | Vulgatibacter sp. | 1971226 | Bacteria | Bacteria | 73.9 | 2.43e-13 | NR | HWV38858.1 | 1971226 | g87066 | i0 | 76.7 | 1.88942307692308 | 43 | 10 | 62 | 0 | 70 | 198 | 1632 | 1674 | HWV38858.1 hypothetical protein [Vulgatibacter sp.] | diamond | 393 | 73.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Vulgatibacteraceae | Vulgatibacter | Vulgatibacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;