contig_metadata
26 rows where bioproject = "PRJNA492363", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25975588 | 25975588 | PRJNA492363_S_NODE_89476_length_207_cov_1.931507_g88655_i0 | PRJNA492363 | 89476 | 207 | 1.931507 | 3.99821949 | Bacteriovoracia bacterium | 3058048 | Bacteria | Bacteria | 89 | 1.12e-18 | NR | MFP5387462.1 | 3058048 | g88655 | i0 | 75 | 1.6231884057971 | 56 | 14 | 81.2 | 0 | 2 | 169 | 192 | 247 | MFP5387462.1 GldG family protein [Bacteriovoracia bacterium] | diamond | 336 | 89 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracia bacterium | |||||
| 25975688 | 25975688 | PRJNA492363_S_NODE_93204_length_205_cov_1.333333_g92383_i0 | PRJNA492363 | 93204 | 205 | 1.333333 | 2.73333265 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 257 | 3.53e-64 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g92383 | i0 | 89.268 | 1.58536585365854 | 205 | 22 | 100 | 0 | 1 | 205 | 903115 | 902911 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 325 | 257 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 26110981 | 26110981 | PRJNA492363_S_NODE_51749_length_232_cov_1.122807_g50928_i0 | PRJNA492363 | 51749 | 232 | 1.1228070000000001 | 2.60491224 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 121 | 3.11e-32 | NR | MES2529214.1 | 3034175 | g50928 | i0 | 82.4 | 0.879310344827586 | 68 | 12 | 87.9 | 0 | 27 | 230 | 94 | 161 | MES2529214.1 sulfite exporter TauE/SafE family protein [Bdellovibrionota bacterium] | diamond | 204 | 121 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 26111810 | 26111810 | PRJNA492363_S_NODE_96941_length_203_cov_1.352113_g96120_i0 | PRJNA492363 | 96941 | 203 | 1.352113 | 2.74478939 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 134 | 6.14e-27 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g96120 | i0 | 80.702 | 11.6650246305419 | 171 | 33 | 84 | 0 | 1 | 171 | 2103636 | 2103466 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 2368 | 134 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 26246250 | 26246250 | PRJNA492363_S_NODE_1046_length_3052_cov_10.773320_g411_i0 | PRJNA492363 | 1046 | 3052 | 10.77332 | 328.8017264 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 555 | 9.56e-186 | NR | QQG35172.1 | 349221 | g411 | i0 | 67.8 | 0.41480996068152 | 422 | 136 | 41.5 | 0 | 2152 | 887 | 1 | 422 | QQG35172.1 MAG: relaxase [Micavibrio aeruginosavorus] | diamond | 1266 | 555 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 26247723 | 26247723 | PRJNA492363_S_NODE_85854_length_209_cov_1.729730_g85033_i0 | PRJNA492363 | 85854 | 209 | 1.72973 | 3.6151357 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 154 | 4.88e-33 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g85033 | i0 | 80.097 | 0.985645933014354 | 206 | 41 | 99 | 0 | 2 | 207 | 3261105 | 3261310 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 206 | 154 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 26383558 | 26383558 | PRJNA492363_S_NODE_85855_length_209_cov_1.729730_g85034_i0 | PRJNA492363 | 85855 | 209 | 1.72973 | 3.6151357 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 309 | 9.85e-80 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g85034 | i0 | 93.301 | 2 | 209 | 14 | 100 | 0 | 1 | 209 | 1617443 | 1617235 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 418 | 309 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 26519903 | 26519903 | PRJNA492363_S_NODE_91392_length_206_cov_1.324138_g90571_i0 | PRJNA492363 | 91392 | 206 | 1.324138 | 2.72772428 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 171 | 4.76e-38 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g90571 | i0 | 82.09 | 1.98058252427184 | 201 | 35 | 97 | 1 | 1 | 200 | 2188093 | 2188293 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 408 | 171 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 26577521 | 26577521 | PRJNA492363_S_NODE_89888_length_207_cov_0.876712_g89067_i0 | PRJNA492363 | 89888 | 207 | 0.876712 | 1.81479384 | Peredibacter | 263370 | Bacteria | Bacteria | 206 | 1.3099999999999999e-48 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g89067 | i0 | 84.541 | 2 | 207 | 32 | 100 | 0 | 1 | 207 | 426509 | 426715 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 414 | 206 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 32917983 | 32917983 | PRJNA492363_S_NODE_100873_length_201_cov_1.285714_g100052_i0 | PRJNA492363 | 100873 | 201 | 1.285714 | 2.58428514 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 130 | 5.64e-34 | NR | MES2526928.1 | 3034175 | g100052 | i0 | 90.8 | 0.970149253731343 | 65 | 6 | 97 | 0 | 196 | 2 | 267 | 331 | MES2526928.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 195 | 130 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 32969557 | 32969557 | PRJNA492363_S_NODE_101178_length_201_cov_0.914286_g100357_i0 | PRJNA492363 | 101178 | 201 | 0.914286 | 1.83771486 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 129 | 6.78e-34 | NR | MFL5785505.1 | 2081706 | g100357 | i0 | 83.3 | 0.985074626865672 | 66 | 11 | 98.5 | 0 | 200 | 3 | 151 | 216 | MFL5785505.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 198 | 129 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 32969766 | 32969766 | PRJNA492363_S_NODE_86186_length_209_cov_0.864865_g85365_i0 | PRJNA492363 | 86186 | 209 | 0.864865 | 1.80756785 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 143 | 6.43e-38 | NR | MES2528094.1 | 3034175 | g85365 | i0 | 89.9 | 1.98086124401914 | 69 | 7 | 99 | 0 | 209 | 3 | 13 | 81 | MES2528094.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 414 | 143 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33003495 | 33003495 | PRJNA492363_S_NODE_101139_length_201_cov_0.914286_g100318_i0 | PRJNA492363 | 101139 | 201 | 0.914286 | 1.83771486 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 68.9 | 1.2e-11 | NR | MES2527525.1 | 3034175 | g100318 | i0 | 91.4 | 0.522388059701492 | 35 | 3 | 52.2 | 0 | 3 | 107 | 441 | 475 | MES2527525.1 HD domain-containing protein [Bdellovibrionota bacterium] | diamond | 105 | 68.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33003728 | 33003728 | PRJNA492363_S_NODE_95091_length_204_cov_1.342657_g94270_i0 | PRJNA492363 | 95091 | 204 | 1.342657 | 2.73902028 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 103 | 9.55e-25 | NR | MES2529235.1 | 3034175 | g94270 | i0 | 81.3 | 0.941176470588235 | 64 | 12 | 94.1 | 0 | 11 | 202 | 1 | 64 | MES2529235.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 192 | 103 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33026846 | 33026846 | PRJNA492363_S_NODE_89820_length_207_cov_0.876712_g88999_i0 | PRJNA492363 | 89820 | 207 | 0.876712 | 1.81479384 | Peredibacter | 263370 | Bacteria | Bacteria | 139 | 5.95e-37 | NR | WP_321394678.1 | 28202 | g88999 | i0 | 98.5 | 3.94202898550725 | 68 | 1 | 98.6 | 0 | 206 | 3 | 377 | 444 | WP_321394678.1 sigma-54 dependent transcriptional regulator [Peredibacter starrii] | diamond | 816 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 33026848 | 33026848 | PRJNA492363_S_NODE_89892_length_207_cov_0.876712_g89071_i0 | PRJNA492363 | 89892 | 207 | 0.876712 | 1.81479384 | Bacteria | 2 | Bacteria | Bacteria | 129 | 1.0699999999999999e-32 | NR | MFL5784329.1 | 2081706 | g89071 | i0 | 97 | 1.94202898550725 | 67 | 2 | 97.1 | 0 | 205 | 5 | 81 | 147 | MFL5784329.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 402 | 129 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 33037860 | 33037860 | PRJNA492363_S_NODE_91636_length_206_cov_0.882759_g90815_i0 | PRJNA492363 | 91636 | 206 | 0.882759 | 1.81848354 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 112 | 6.47e-29 | NR | MES2526115.1 | 3034175 | g90815 | i0 | 85.3 | 0.990291262135922 | 68 | 10 | 99 | 0 | 206 | 3 | 79 | 146 | MES2526115.1 response regulator [Bdellovibrionota bacterium] | diamond | 204 | 112 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33054808 | 33054808 | PRJNA492363_S_NODE_70269_length_223_cov_1.580247_g69448_i0 | PRJNA492363 | 70269 | 223 | 1.580247 | 3.52395081 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 77.8 | 8.27e-15 | NR | WP_321398940.1 | 28202 | g69448 | i0 | 60.3 | 0.847533632286996 | 63 | 25 | 84.8 | 0 | 191 | 3 | 1 | 63 | WP_321398940.1 hypothetical protein [Peredibacter starrii] | diamond | 189 | 77.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 33054914 | 33054914 | PRJNA492363_S_NODE_94941_length_204_cov_1.720280_g94120_i0 | PRJNA492363 | 94941 | 204 | 1.72028 | 3.5093712 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 58.9 | 1.94e-8 | NR | MCM2348728.1 | 2081706 | g94120 | i0 | 59.6 | 0.691176470588235 | 47 | 19 | 69.1 | 0 | 141 | 1 | 2 | 48 | MCM2348728.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 141 | 58.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 33054939 | 33054939 | PRJNA492363_S_NODE_99029_length_202_cov_0.907801_g98208_i0 | PRJNA492363 | 99029 | 202 | 0.907801 | 1.83375802 | Bacteriovoracia bacterium | 3058048 | Bacteria | Bacteria | 113 | 1.76e-28 | NR | MFP5458910.1 | 3058048 | g98208 | i0 | 77.6 | 0.995049504950495 | 67 | 15 | 99.5 | 0 | 1 | 201 | 140 | 206 | MFP5458910.1 DUF2071 domain-containing protein [Bacteriovoracia bacterium] | diamond | 201 | 113 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracia bacterium | |||||
| 33071808 | 33071808 | PRJNA492363_S_NODE_78589_length_216_cov_2.064516_g77768_i0 | PRJNA492363 | 78589 | 216 | 2.064516 | 4.45935456 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 130 | 4.55e-33 | NR | MES2527789.1 | 3034175 | g77768 | i0 | 87.3 | 0.986111111111111 | 71 | 9 | 98.6 | 0 | 3 | 215 | 543 | 613 | MES2527789.1 phosphoenolpyruvate carboxylase [Bdellovibrionota bacterium] | diamond | 213 | 130 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33089112 | 33089112 | PRJNA492363_S_NODE_99014_length_202_cov_0.907801_g98193_i0 | PRJNA492363 | 99014 | 202 | 0.907801 | 1.83375802 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 97.8 | 2.15e-22 | NR | MES2527733.1 | 3034175 | g98193 | i0 | 94.2 | 0.772277227722772 | 52 | 3 | 77.2 | 0 | 2 | 157 | 290 | 341 | MES2527733.1 DUF3108 domain-containing protein [Bdellovibrionota bacterium] | diamond | 156 | 97.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33106106 | 33106106 | PRJNA492363_S_NODE_91590_length_206_cov_0.882759_g90769_i0 | PRJNA492363 | 91590 | 206 | 0.882759 | 1.81848354 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 127 | 2.05e-33 | NR | MES2529199.1 | 3034175 | g90769 | i0 | 86.8 | 0.990291262135922 | 68 | 9 | 99 | 0 | 206 | 3 | 247 | 314 | MES2529199.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 204 | 127 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33140142 | 33140142 | PRJNA492363_S_NODE_86087_length_209_cov_0.864865_g85266_i0 | PRJNA492363 | 86087 | 209 | 0.864865 | 1.80756785 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 105 | 5.9e-25 | NR | MES2528060.1 | 3034175 | g85266 | i0 | 72.5 | 0.990430622009569 | 69 | 19 | 99 | 0 | 209 | 3 | 286 | 354 | MES2528060.1 twitch domain-containing radical SAM protein [Bdellovibrionota bacterium] | diamond | 207 | 105 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33157125 | 33157125 | PRJNA492363_S_NODE_86160_length_209_cov_0.864865_g85339_i0 | PRJNA492363 | 86160 | 209 | 0.864865 | 1.80756785 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 127 | 2.8899999999999996e-32 | NR | MES2528527.1 | 3034175 | g85339 | i0 | 89.9 | 0.990430622009569 | 69 | 7 | 99 | 0 | 1 | 207 | 172 | 240 | MES2528527.1 ABC transporter substrate-binding protein [Bdellovibrionota bacterium] | diamond | 207 | 127 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 33163108 | 33163108 | PRJNA492363_S_NODE_14200_length_264_cov_1.261084_g13379_i0 | PRJNA492363 | 14200 | 264 | 1.261084 | 3.32926176 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 134 | 2.1799999999999997e-35 | NR | WP_015089288.1 | 959 | g13379 | i0 | 70.5 | 2 | 88 | 26 | 100 | 0 | 1 | 264 | 179 | 266 | WP_015089288.1 type II toxin-antitoxin system HipA family toxin [Bdellovibrio bacteriovorus] | diamond | 528 | 134 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;