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contig_metadata

23 rows where bioproject = "PRJNA492363", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

  • Pseudomonadati · 23 ✖

bioproject 1

  • PRJNA492363 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25897226 25897226 PRJNA492363_S_NODE_75771_length_219_cov_2.683544_g74950_i0 PRJNA492363 75771 219 2.683544 5.87696136 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 93.2 7.88e-21   NR HEX4278163.1 2212468 g74950 i0 69 1.58904109589041 58 18 79.5 0 23 196 169 226 HEX4278163.1 PIG-L deacetylase family protein [Bryobacteraceae bacterium] diamond 348 93.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
25975648 25975648 PRJNA492363_S_NODE_91372_length_206_cov_1.324138_g90551_i0 PRJNA492363 91372 206 1.324138 2.72772428 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 52.8 0.018   NTclustered gi|2874253709|emb|OY969474.1| 171953 g90551 i0 100 0.135922330097087 28 0 14 0 114 141 688502 688529 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26111633 26111633 PRJNA492363_S_NODE_89805_length_207_cov_0.876712_g88984_i0 PRJNA492363 89805 207 0.876712 1.81479384 Holophagales bacterium 2478486 Bacteria Bacteria 176 1.03e-39   NTclustered gi|1958024485|gb|CP064972.1| 2478486 g88984 i0 82.587 45.7004830917874 201 33 97 2 4 203 1577558 1577359 Holophagales bacterium isolate EsbW_18-Q3-R4-48_BAT3C.4_cln chromosome, complete genome blastn 9460 176 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales     Holophagales bacterium
26382557 26382557 PRJNA492363_S_NODE_23479_length_245_cov_2.179348_g22658_i0 PRJNA492363 23479 245 2.179348 5.3394026 Terriglobia bacterium 2081523 Bacteria Bacteria 185 2.09e-42   NTclustered gi|2518552083|emb|OX638355.1| 2081523 g22658 i0 82.192 69.0897959183673 219 36 89 1 3 221 5076892 5076677 MAG: Terriglobia bacterium isolate 290eebee-5386-4bec-b87c-7b5c19ab3581 genome assembly, chromosome: 1 blastn 16927 185 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
26383566 26383566 PRJNA492363_S_NODE_85919_length_209_cov_1.493243_g85098_i0 PRJNA492363 85919 209 1.493243 3.12087787 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 105 4.48e-25   NR HZJ33333.1 2910147 g85098 i0 93 4.90909090909091 57 4 81.8 0 173 3 39 95 HZJ33333.1 MFS transporter [Vicinamibacterales bacterium] diamond 1026 105 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
26518554 26518554 PRJNA492363_S_NODE_14048_length_265_cov_1.323529_g13227_i0 PRJNA492363 14048 265 1.323529 3.50735185 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 118 3.5e-30   NR HZM62539.1 2910147 g13227 i0 80 1.69811320754717 75 15 84.9 0 15 239 1 75 HZM62539.1 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase [Vicinamibacterales bacterium] diamond 450 118 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32918026 32918026 PRJNA492363_S_NODE_12265_length_279_cov_1.807339_g11444_i0 PRJNA492363 12265 279 1.807339 5.04247581 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 45.4 0.00623   NR MCU0237941.1 2283092 g11444 i0 60 0.43010752688172 40 16 43 0 4 123 331 370 MCU0237941.1 DJ-1/PfpI family protein [Pyrinomonadaceae bacterium] diamond 120 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32935408 32935408 PRJNA492363_S_NODE_97217_length_203_cov_0.901408_g96396_i0 PRJNA492363 97217 203 0.901408 1.82985824 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 88.6 2.19e-20   NR HZT60060.1 2283092 g96396 i0 62.5 0.945812807881773 64 24 94.6 0 12 203 43 106 HZT60060.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 192 88.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32952635 32952635 PRJNA492363_S_NODE_91402_length_206_cov_1.324138_g90581_i0 PRJNA492363 91402 206 1.324138 2.72772428 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 48.5 2.09e-4   NR HKP71062.1 2283092 g90581 i0 50 1.19417475728155 44 22 64.1 0 132 1 1 44 HKP71062.1 glycoside hydrolase family 88 protein [Pyrinomonadaceae bacterium] diamond 246 48.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32958611 32958611 PRJNA492363_S_NODE_97002_length_203_cov_1.133803_g96181_i0 PRJNA492363 97002 203 1.133803 2.30162009 Pseudomonadati 3379134 Bacteria Bacteria 45.4 0.00251   NR MES2391110.1 1978231 g96181 i0 39.1 4.13793103448276 64 37 93.1 2 15 203 1095 1157 MES2391110.1 hypothetical protein [Acidobacteriota bacterium] diamond 840 45.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32969796 32969796 PRJNA492363_S_NODE_91634_length_206_cov_0.882759_g90813_i0 PRJNA492363 91634 206 0.882759 1.81848354 Kocuria sp. cx-116 2771378 Bacteria Bacteria 95.1 1.26e-23   NR WP_190782522.1 2771378 g90813 i0 87.5 0.815533980582524 56 7 81.6 0 3 170 40 95 WP_190782522.1 hypothetical protein [Kocuria sp. cx-116] diamond 168 95.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Candidatus Korobacteraceae Candidatus Sulfotelmatobacter Kocuria sp. cx-116
32969837 32969837 PRJNA492363_S_NODE_98898_length_202_cov_1.148936_g98077_i0 PRJNA492363 98898 202 1.148936 2.32085072 Candidatus Sulfopaludibacter sp. SbA3 2043164 Bacteria Bacteria 56.2 3.54e-7   NR SPE37511.1 2043164 g98077 i0 47.5 1.81188118811881 61 30 89.1 2 21 200 54 113 SPE37511.1 NHL repeat containing protein (fragment) [Candidatus Sulfopaludibacter sp. SbA3] diamond 366 56.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Sulfopaludibacter Candidatus Sulfopaludibacter sp. SbA3
33054787 33054787 PRJNA492363_S_NODE_59157_length_229_cov_1.142857_g58336_i0 PRJNA492363 59157 229 1.142857 2.61714253 Blastocatellia bacterium 2052146 Bacteria Bacteria 143 9.81e-41   NR MBA2336010.1 2052146 g58336 i0 84 2.93449781659389 75 12 98.3 0 227 3 52 126 MBA2336010.1 tRNA pseudouridine(38-40) synthase TruA [Blastocatellia bacterium] diamond 672 143 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
33054910 33054910 PRJNA492363_S_NODE_93533_length_205_cov_0.888889_g92712_i0 PRJNA492363 93533 205 0.888889 1.82222245 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 120 5.65e-30   NR HEX2060071.1 2651171 g92712 i0 83.8 3.98048780487805 68 11 99.5 0 2 205 126 193 HEX2060071.1 gamma-glutamyltransferase [Thermoanaerobaculia bacterium] diamond 816 120 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
33071633 33071633 PRJNA492363_S_NODE_100821_length_201_cov_1.371429_g100000_i0 PRJNA492363 100821 201 1.371429 2.75657229 Terriglobales bacterium 2282142 Bacteria Bacteria 70.1 4.77e-12   NR HEY6937309.1 2282142 g100000 i0 54.1 5.58208955223881 61 28 91 0 184 2 453 513 HEY6937309.1 EAL domain-containing protein [Terriglobales bacterium] diamond 1122 70.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
33077873 33077873 PRJNA492363_S_NODE_100989_length_201_cov_0.914286_g100168_i0 PRJNA492363 100989 201 0.914286 1.83771486 Bacteria 2 Bacteria Bacteria 102 1.49e-23   NR MBL8123317.1 2052146 g100168 i0 74.6 4.61194029850746 63 16 94 0 201 13 548 610 MBL8123317.1 VWA domain-containing protein [Blastocatellia bacterium] diamond 927 102 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
33122931 33122931 PRJNA492363_S_NODE_110695_length_194_cov_2.406015_g109874_i0 PRJNA492363 110695 194 2.406015 4.6676691 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 69.3 6.77e-12   NR HXG85097.1 2283092 g109874 i0 60.9 0.989690721649485 64 21 99 2 193 2 141 200 HXG85097.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 192 69.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
33129187 33129187 PRJNA492363_S_NODE_96759_length_203_cov_1.816901_g95938_i0 PRJNA492363 96759 203 1.816901 3.68830903 Pseudomonadati 3379134 Bacteria Bacteria 108 1.3e-26   NR HXW13249.1 2081523 g95938 i0 76.1 4.77339901477832 67 16 99 0 1 201 257 323 HXW13249.1 class I fructose-bisphosphate aldolase [Terriglobia bacterium] diamond 969 108 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
33140133 33140133 PRJNA492363_S_NODE_83807_length_210_cov_1.765101_g82986_i0 PRJNA492363 83807 210 1.765101 3.7067121 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 112 2.9800000000000003e-27   NR MEQ1760072.1 2910147 g82986 i0 88.3 0.857142857142857 60 7 85.7 0 180 1 39 98 MEQ1760072.1 efflux RND transporter periplasmic adaptor subunit [Vicinamibacterales bacterium] diamond 180 112 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
33140135 33140135 PRJNA492363_S_NODE_83927_length_210_cov_1.234899_g83106_i0 PRJNA492363 83927 210 1.234899 2.5932879 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 87.8 3.08e-18   NR HEY0658295.1 2283092 g83106 i0 64.7 0.971428571428571 68 24 97.1 0 205 2 32 99 HEY0658295.1 sigma-54 dependent transcriptional regulator [Pyrinomonadaceae bacterium] diamond 204 87.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
33140149 33140149 PRJNA492363_S_NODE_87767_length_208_cov_1.639456_g86946_i0 PRJNA492363 87767 208 1.639456 3.41006848 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 70.9 2.76e-12   NR HEY4365576.1 2212468 g86946 i0 58.3 0.865384615384615 60 25 86.5 0 194 15 336 395 HEY4365576.1 HAD-IIIC family phosphatase [Bryobacteraceae bacterium] diamond 180 70.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
33157056 33157056 PRJNA492363_S_NODE_51704_length_232_cov_1.497076_g50883_i0 PRJNA492363 51704 232 1.497076 3.47321632 Edaphobacter sp. 1934404 Bacteria Bacteria 145 2.47e-38   NR WP_325379830.1 1934404 g50883 i0 96.1 0.995689655172414 77 3 99.6 0 231 1 443 519 WP_325379830.1 DEAD/DEAH box helicase, partial [Edaphobacter sp.] diamond 231 145 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
33157195 33157195 PRJNA492363_S_NODE_98848_length_202_cov_1.340426_g98027_i0 PRJNA492363 98848 202 1.340426 2.70766052 Edaphobacter sp. 1934404 Bacteria Bacteria 43.5 0.00188   NR WP_325379828.1 1934404 g98027 i0 100 0.326732673267327 22 0 32.7 0 135 200 2 23 WP_325379828.1 hypothetical protein [Edaphobacter sp.] diamond 66 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;