RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA492363", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA492363 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25975564 25975564 PRJNA492363_S_NODE_88052_length_208_cov_0.870748_g87231_i0 PRJNA492363 88052 208 0.870748 1.81115584 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 113 8.240000000000001e-21   NTclustered gi|2874254000|emb|OY970325.1| 157466 g87231 i0 79.07 207.639423076923 172 30 81 6 1 168 3442355 3442524 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 43189 113 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
26383686 26383686 PRJNA492363_S_NODE_89831_length_207_cov_0.876712_g89010_i0 PRJNA492363 89831 207 0.876712 1.81479384 Armatimonadota bacterium 2033014 Bacteria Bacteria 129 6.87e-33   NR MES2464184.1 2033014 g89010 i0 89.7 0.985507246376812 68 7 98.6 0 206 3 239 306 MES2464184.1 valine--tRNA ligase [Armatimonadota bacterium] diamond 204 129 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
33003660 33003660 PRJNA492363_S_NODE_79267_length_215_cov_1.616883_g78446_i0 PRJNA492363 79267 215 1.616883 3.47629845 Armatimonadota bacterium 2033014 Bacteria Bacteria 79.3 1.11e-15   NR MBW3636101.1 2033014 g78446 i0 71.4 1.38139534883721 49 14 68.4 0 158 12 32 80 MBW3636101.1 molybdopterin-dependent oxidoreductase [Armatimonadota bacterium] diamond 297 79.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;