RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492363", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA492363 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33140204 33140204 PRJNA492363_S_NODE_98927_length_202_cov_0.907801_g98106_i0 PRJNA492363 98927 202 0.907801 1.83375802 Rhodothermia bacterium 2497633 Bacteria Bacteria 76.3 3.27e-14   NR MBN8588282.1 2497633 g98106 i0 51.7 0.861386138613861 58 28 86.1 0 6 179 706 763 MBN8588282.1 DUF3883 domain-containing protein [Rhodothermia bacterium] diamond 174 76.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia       Rhodothermia bacterium
33157160 33157160 PRJNA492363_S_NODE_91680_length_206_cov_0.882759_g90859_i0 PRJNA492363 91680 206 0.882759 1.81848354 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 83.2 4.74e-18   NR HLT48245.1 2838334 g90859 i0 70.6 0.990291262135922 68 20 99 0 3 206 100 167 HLT48245.1 GreA/GreB family elongation factor [Rubricoccaceae bacterium] diamond 204 83.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;