RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA492363", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA492363 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26169409 26169409 PRJNA492363_S_NODE_1613_length_840_cov_22118.237484_g853_i0 PRJNA492363 1613 840 22118.237484 185793.1948656 Minisyncoccota bacterium 2053589 Bacteria Bacteria 254 1.36e-75   NR MCK9345045.1 2053589 g853 i0 54.3 1.64285714285714 230 104 81.8 1 772 86 484 713 MCK9345045.1 AAA family ATPase [Candidatus Paceibacterota bacterium] diamond 1380 254 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26246582 26246582 PRJNA492363_S_NODE_1526_length_922_cov_12.540070_g772_i0 PRJNA492363 1526 922 12.54007 115.6194454 Minisyncoccota bacterium 2053589 Bacteria Bacteria 364 2.15e-117   NR MCK9345045.1 2053589 g772 i0 63.9 0.927331887201735 285 103 92.7 0 912 58 194 478 MCK9345045.1 AAA family ATPase [Candidatus Paceibacterota bacterium] diamond 855 364 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32986603 32986603 PRJNA492363_S_NODE_2275_length_603_cov_6.378229_g1475_i0 PRJNA492363 2275 603 6.378229 38.46072087 Minisyncoccota bacterium 2053589 Bacteria Bacteria 214 1.44e-61   NR MCK9345045.1 2053589 g1475 i0 57.1 0.985074626865672 198 81 98.5 1 596 3 4 197 MCK9345045.1 AAA family ATPase [Candidatus Paceibacterota bacterium] diamond 594 214 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
33054680 33054680 PRJNA492363_S_NODE_114157_length_191_cov_2.461538_g113336_i0 PRJNA492363 114157 191 2.461538 4.70153758 Minisyncoccota bacterium 2053589 Bacteria Bacteria 97.8 3.78e-22   NR MDD2657816.1 2053589 g113336 i0 94 0.785340314136126 50 3 78.5 0 41 190 1 50 MDD2657816.1 TRAFs-binding domain-containing protein [Candidatus Paceibacterota bacterium] diamond 150 97.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;