RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA492363", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA492363 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32935402 32935402 PRJNA492363_S_NODE_96865_length_203_cov_1.352113_g96044_i0 PRJNA492363 96865 203 1.352113 2.74478939 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 53.5 3.46e-6   NR OYX40715.1 1970479 g96044 i0 49.2 0.960591133004926 65 33 96.1 0 7 201 579 643 OYX40715.1 MAG: hypothetical protein B7Y94_06095 [Candidatus Saccharibacteria bacterium 32-49-12] diamond 195 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
33054887 33054887 PRJNA492363_S_NODE_89661_length_207_cov_1.315068_g88840_i0 PRJNA492363 89661 207 1.315068 2.72219076 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 81.3 2.5e-17   NR MDB5176130.1 2026720 g88840 i0 85.7 0.608695652173913 42 6 60.9 0 128 3 1 42 MDB5176130.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 126 81.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
33106149 33106149 PRJNA492363_S_NODE_98966_length_202_cov_0.907801_g98145_i0 PRJNA492363 98966 202 0.907801 1.83375802 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 61.6 4.84e-9   NR OYX40715.1 1970479 g98145 i0 44.6 0.965346534653465 65 35 95 1 202 11 387 451 OYX40715.1 MAG: hypothetical protein B7Y94_06095 [Candidatus Saccharibacteria bacterium 32-49-12] diamond 195 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;