RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA492363", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA492363 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32952395 32952395 PRJNA492363_S_NODE_100786_length_201_cov_1.371429_g99965_i0 PRJNA492363 100786 201 1.371429 2.75657229 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 130 2.1399999999999996e-37   NR HTD86170.1 2838779 g99965 i0 90.9 1.97014925373134 66 6 98.5 0 200 3 16 81 HTD86170.1 hypothetical protein [Candidatus Binatia bacterium] diamond 396 130 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
33054916 33054916 PRJNA492363_S_NODE_95125_length_204_cov_1.258741_g94304_i0 PRJNA492363 95125 204 1.258741 2.56783164 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 100 6.399999999999999e-24   NR HZC22858.1 2838779 g94304 i0 64.1 0.941176470588235 64 23 94.1 0 2 193 156 219 HZC22858.1 glycosyl hydrolase family 65 protein [Candidatus Binatia bacterium] diamond 192 100 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
33071864 33071864 PRJNA492363_S_NODE_89917_length_207_cov_0.876712_g89096_i0 PRJNA492363 89917 207 0.876712 1.81479384 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 124 1.6199999999999998e-32   NR MEO6026083.1 2838779 g89096 i0 79.4 1.97101449275362 68 14 98.6 0 206 3 240 307 MEO6026083.1 TIGR03617 family F420-dependent LLM class oxidoreductase [Candidatus Binatia bacterium] diamond 408 124 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;