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contig_metadata

20 rows where bioproject = "PRJNA492280" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA492280 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
452136 452136 PRJNA492280_P_NODE_31721_length_151_cov_2.833333_g31614_i0 PRJNA492280 31721 151 2.833333 4.27833283 Pyrobaculum aerophilum 13773 Archaea Archaea 135 1.19e-27   NTclustered gi|18308975|gb|AE009441.1| 178306 g31614 i0 100 0.973509933774834 73 0 97 0 4 76 1167221 1167293 Pyrobaculum aerophilum str. IM2, complete genome blastn 147 135 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
452158 452158 PRJNA492280_P_NODE_33781_length_150_cov_3.654867_g33674_i0 PRJNA492280 33781 150 3.654867 5.4823005 Pyrobaculum aerophilum 13773 Archaea Archaea 268 1.11e-67   NTclustered gi|18308975|gb|AE009441.1| 178306 g33674 i0 99.324 0.986666666666667 148 1 99 0 3 150 2046668 2046815 Pyrobaculum aerophilum str. IM2, complete genome blastn 148 268 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
3002689 3002689 PRJNA492280_P_NODE_24623_length_164_cov_2.637795_g24516_i0 PRJNA492280 24623 164 2.637795 4.3259838 Ignisphaera sp. 2268142 Archaea Archaea 55.5 4.08e-7   NR MCI4437658.1 2268142 g24516 i0 100 0.439024390243902 24 0 43.9 0 162 91 212 235 MCI4437658.1 hypothetical protein [Ignisphaera sp.] diamond 72 55.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.
3002701 3002701 PRJNA492280_P_NODE_26563_length_163_cov_5.746032_g26456_i0 PRJNA492280 26563 163 5.746032 9.36603216 Halomicrobium urmianum 1586233 Archaea Archaea 71.3 3.75e-8   NTclustered gi|2105355784|gb|CP084090.1| 1586233 g26456 i0 84.507 0.43558282208589 71 11 44 0 91 161 455410 455480 Halomicrobium urmianum strain IBRC-M: 10911 chromosome, complete genome blastn 71 71.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium urmianum
4927264 4927264 PRJNA492280_P_NODE_904_length_461_cov_6.457547_g809_i0 PRJNA492280 904 461 6.457547 29.76929167 Pyrococcus 2260 Archaea Archaea 699 0   NTclustered gi|8096280|dbj|AB017486.2| 2261 g809 i0 93.235 4.10412147505423 473 15 99 3 3 458 148 620 Pyrococcus furiosus pcn gene for proliferation cell nuclear antigen, complete cds blastn 1892 699 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
8105245 8105245 PRJNA492280_P_NODE_3827_length_252_cov_4.720930_g3720_i0 PRJNA492280 3827 252 4.72093 11.8967436 Halalkalicoccus salilacus 3117459 Archaea Archaea 276 1.2499999999999998e-69   NTclustered gi|2674869203|gb|CP144461.1| 3117459 g3720 i0 97.531 171.027777777778 162 2 92 1 89 248 3202800 3202961 Halalkalicoccus salilacus strain FCH27 chromosome, complete genome blastn 43099 276 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
11930605 11930605 PRJNA492280_P_NODE_25590_length_164_cov_2.433071_g25483_i0 PRJNA492280 25590 164 2.433071 3.99023644 Halobaculum marinum 3031996 Archaea Archaea 52.8 0.014   NTclustered gi|2463608140|gb|CP119989.1| 3031996 g25483 i0 100 0.170731707317073 28 0 17 0 112 139 295319 295292 Halobaculum marinum strain DT55 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum marinum
18303690 18303690 PRJNA492280_P_NODE_32355_length_150_cov_6.637168_g32248_i0 PRJNA492280 32355 150 6.637168 9.955752 Salarchaeum sp. JOR-1 2599399 Archaea Archaea 52.8 0.012   NTclustered gi|1717336197|gb|CP042241.1| 2599399 g32248 i0 96.774 0.206666666666667 31 1 21 0 109 139 2255608 2255638 Salarchaeum sp. JOR-1 chromosome, complete genome blastn 31 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum sp. JOR-1
21500921 21500921 PRJNA492280_P_NODE_32697_length_150_cov_5.283186_g32590_i0 PRJNA492280 32697 150 5.283186 7.924779 Halobacteriales 2235 Archaea Archaea 137 3.28e-28   NTclustered gi|451319833|gb|KC465585.1| 114243 g32590 i0 100 92.5333333333333 74 0 97 0 75 148 756 829 Uncultured euryarchaeote clone DSFBPENV12arc_10E 16S ribosomal RNA gene, partial sequence blastn 13880 137 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
22775898 22775898 PRJNA492280_P_NODE_18978_length_164_cov_3.503937_g18871_i0 PRJNA492280 18978 164 3.503937 5.74645668 Natronomonas 63743 Archaea Archaea 137 3.67e-28   NTclustered gi|470490702|ref|NR_077004.1| 2257 g18871 i0 100 63.8292682926829 74 0 88 0 4 77 751 824 Natronomonas pharaonis strain Gabara 23S ribosomal RNA gene, complete sequence blastn 10468 137 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas pharaonis
23404231 23404231 PRJNA492280_P_NODE_20519_length_164_cov_3.251969_g20412_i0 PRJNA492280 20519 164 3.251969 5.33322916 Halococcus dombrowskii 179637 Archaea Archaea 228 2.1199999999999996e-55   NTclustered gi|2221489803|gb|CP095005.1| 179637 g20412 i0 91.304 1.5609756097561 161 9 98 1 4 164 1069220 1069375 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 256 228 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
26791660 26791660 PRJNA492280_P_NODE_22501_length_164_cov_2.929134_g22394_i0 PRJNA492280 22501 164 2.929134 4.80377976 Natronomonas sp. 2184060 Archaea Archaea 51.2 1.19e-5   NR MFT4946158.1 2184060 g22394 i0 87.5 0.439024390243902 24 3 43.9 0 5 76 129 152 MFT4946158.1 putative membrane protein [Natronomonas sp.] diamond 72 51.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas sp.
27013069 27013069 PRJNA492280_P_NODE_15882_length_164_cov_4.275591_g15775_i0 PRJNA492280 15882 164 4.275591 7.01196924 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 43.9 0.00502   NR MBT7787159.1 2026803 g15775 i0 46.2 0.713414634146341 39 21 71.3 0 7 123 6 44 MBT7787159.1 PDZ domain-containing protein [Candidatus Woesearchaeota archaeon] diamond 117 43.9 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
28844699 28844699 PRJNA492280_P_NODE_31428_length_151_cov_3.140351_g31321_i0 PRJNA492280 31428 151 3.140351 4.74193001 Haloarcula amylovorans 2562280 Archaea Archaea 59.7 1.91e-9   NR WP_135306088.1 2562280 g31321 i0 92.9 0.556291390728477 28 2 55.6 0 87 4 84 111 WP_135306088.1 DUF6141 family protein [Haloarcula amylovorans] diamond 84 59.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula amylovorans
30644927 30644927 PRJNA492280_P_NODE_33453_length_150_cov_3.973451_g33346_i0 PRJNA492280 33453 150 3.973451 5.9601765 archaeon 1906665 Archaea Archaea 72 1.13e-13   NR RYH29009.1 1906665 g33346 i0 70.4 1.08 54 7 90 1 6 140 101 154 RYH29009.1 MAG: hypothetical protein EON65_10100 [archaeon] diamond 162 72 1 Archaea               archaeon
30961172 30961172 PRJNA492280_P_NODE_21214_length_164_cov_3.125984_g21107_i0 PRJNA492280 21214 164 3.125984 5.12661376 archaeon 1906665 Archaea Archaea 41.6 0.0333   NR RYH22982.1 1906665 g21107 i0 72.7 0.402439024390244 22 6 40.2 0 156 91 628 649 RYH22982.1 MAG: DUF4395 family protein [archaeon] diamond 66 41.6 1 Archaea               archaeon
31024309 31024309 PRJNA492280_P_NODE_21355_length_164_cov_3.094488_g21248_i0 PRJNA492280 21355 164 3.094488 5.07496032 Nitrosopumilus sp. 2024843 Archaea Archaea 43.1 0.00926   NR MDA7495390.1 2024843 g21248 i0 44.2 0.951219512195122 52 26 89.6 2 8 154 241 292 MDA7495390.1 hypothetical protein [Nitrosopumilus sp.] diamond 156 43.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31751426 31751426 PRJNA492280_P_NODE_14437_length_164_cov_4.818898_g14330_i0 PRJNA492280 14437 164 4.818898 7.90299272 Haloarcula nitratireducens 2487749 Archaea Archaea 52.8 7.28e-7   NR WP_220581994.1 2487749 g14330 i0 82.4 0.621951219512195 34 1 62.2 1 164 63 21 49 WP_220581994.1 hypothetical protein [Haloarcula nitratireducens] diamond 102 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula nitratireducens
32384303 32384303 PRJNA492280_P_NODE_31739_length_151_cov_2.815789_g31632_i0 PRJNA492280 31739 151 2.815789 4.25184139 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 58.5 1.11e-8   NR MFA6531196.1 3018267 g31632 i0 54.2 1.17218543046358 59 14 91.4 1 144 7 56 114 MFA6531196.1 RNA ligase partner protein [Candidatus Micrarchaeia archaeon] diamond 177 58.5 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon
32605597 32605597 PRJNA492280_P_NODE_20340_length_164_cov_3.283465_g20233_i0 PRJNA492280 20340 164 3.283465 5.3848826 Haloarcula nitratireducens 2487749 Archaea Archaea 67.8 1.86e-11   NR WP_220581842.1 2487749 g20233 i0 62.5 1.17073170731707 64 8 87.8 1 161 18 25 88 WP_220581842.1 PAS domain S-box protein [Haloarcula nitratireducens] diamond 192 67.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula nitratireducens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;