RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA492280" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA492280 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6829652 6829652 PRJNA492280_P_NODE_3446_length_262_cov_6.840000_g3339_i0 PRJNA492280 3446 262 6.84 17.9208 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 80.5 1.1e-10   NTclustered gi|2874253737|emb|OY969579.1| 3107663 g3339 i0 85.526 0.694656488549618 76 11 29 0 187 262 858195 858270 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD01689.bin.c.2 genome assembly, chromosome: 1 blastn 182 80.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
11930493 11930493 PRJNA492280_P_NODE_12590_length_164_cov_6.291339_g12483_i0 PRJNA492280 12590 164 6.291339 10.31779596 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 95.3 2.24e-15   NTclustered gi|2874253703|emb|OY969429.1| 3107663 g12483 i0 91.304 0.591463414634146 69 6 42 0 89 157 635830 635898 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD05705.bin.c.4 genome assembly, chromosome: 1 blastn 97 95.3 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
14480608 14480608 PRJNA492280_P_NODE_26232_length_164_cov_2.055118_g26125_i0 PRJNA492280 26232 164 2.0551179999999998 3.37039352 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 141 2.84e-29   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g26125 i0 100 73.1951219512195 76 0 91 0 89 164 5032434 5032509 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 12004 141 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32794291 32794291 PRJNA492280_P_NODE_29560_length_151_cov_7.096491_g29453_i0 PRJNA492280 29560 151 7.096491 10.71570141 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 60.8 4.24e-9   NR HTA57302.1 2952909 g29453 i0 59.3 1.0728476821192101 54 16 95.4 1 147 4 76 129 HTA57302.1 PP2C family protein-serine/threonine phosphatase [Candidatus Baltobacteraceae bacterium] diamond 162 60.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;