RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492280" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492280 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8105200 8105200 PRJNA492280_P_NODE_31147_length_151_cov_3.377193_g31040_i0 PRJNA492280 31147 151 3.377193 5.09956143 Candidatus Criblamydia sequanensis 340071 Bacteria Bacteria 150 4.2499999999999996e-32   NTclustered gi|343183577|gb|JN201882.1| 1437425 g31040 i0 84.81 122.582781456954 158 14 99 2 1 149 2432 2588 Criblamydia sequanensis 23S ribosomal RNA gene, complete sequence blastn 18510 150 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Candidatus Criblamydia Candidatus Criblamydia sequanensis
30644924 30644924 PRJNA492280_P_NODE_24373_length_164_cov_2.677165_g24266_i0 PRJNA492280 24373 164 2.677165 4.3905506 Candidatus Protochlamydia naegleriophila 389348 Bacteria Bacteria 89 1.1e-20   NR WP_032124077.1 389348 g24266 i0 78.2 1.00609756097561 55 9 95.1 1 4 159 10 64 WP_032124077.1 NADH-quinone oxidoreductase subunit B [Candidatus Protochlamydia naegleriophila] diamond 165 89 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;