RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA492280" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA492280 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26791666 26791666 PRJNA492280_P_NODE_29541_length_151_cov_7.245614_g29434_i0 PRJNA492280 29541 151 7.245614 10.94087714 Candidatus Muiribacteriota bacterium 3061976 Bacteria Bacteria 47 2.85e-4   NR MFA5480060.1 3061976 g29434 i0 91.7 2.86092715231788 24 2 47.7 0 3 74 200 223 MFA5480060.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [Candidatus Muiribacteriota bacterium] diamond 432 47 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota         Candidatus Muiribacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;