RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA492280" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA492280 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5555589 5555589 PRJNA492280_P_NODE_26025_length_164_cov_2.251969_g25918_i0 PRJNA492280 26025 164 2.251969 3.69322916 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 111 2.23e-20   NTclustered gi|2874254000|emb|OY970325.1| 157466 g25918 i0 94.444 15.7012195121951 72 4 44 0 90 161 1305243 1305314 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 2575 111 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
8751736 8751736 PRJNA492280_P_NODE_11567_length_164_cov_9.716535_g11460_i0 PRJNA492280 11567 164 9.716535 15.9351174 Fimbriimonas 1005038 Bacteria Bacteria 95.3 2.24e-15   NTclustered gi|663071213|gb|CP007139.1| 661478 g11460 i0 93.651 0.810975609756098 63 4 38 0 2 64 28971 29033 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 133 95.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
11930492 11930492 PRJNA492280_P_NODE_12530_length_164_cov_6.370079_g12423_i0 PRJNA492280 12530 164 6.370079 10.44692956 Armatimonadetes bacterium Uphvl-Ar1 2004467 Bacteria Bacteria 91.6 2.9e-14   NTclustered gi|1199098093|gb|CP021423.1| 2004467 g12423 i0 89.333 0.914634146341463 75 4 45 3 4 76 1548802 1548730 Armatimonadetes bacterium Uphvl-Ar1 genome blastn 150 91.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Uphvl-Ar1
15754472 15754472 PRJNA492280_P_NODE_11633_length_164_cov_9.196850_g11526_i0 PRJNA492280 11633 164 9.19685 15.082834 Fimbriimonas sp. 1936159 Bacteria Bacteria 163 6.06e-36   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g11526 i0 84.615 60.9756097560976 182 8 99 9 2 163 1687675 1687856 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 10000 163 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
17676712 17676712 PRJNA492280_P_NODE_3534_length_259_cov_16.018018_g3427_i0 PRJNA492280 3534 259 16.018018 41.48666662 Fimbriimonas 1005038 Bacteria Bacteria 195 3.7e-45   NTclustered gi|663071213|gb|CP007139.1| 661478 g3427 i0 95.122 136.667953667954 123 6 79 0 48 170 29519 29641 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 35397 195 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
22128524 22128524 PRJNA492280_P_NODE_6478_length_204_cov_3.502994_g6371_i0 PRJNA492280 6478 204 3.502994 7.14610776 Fimbriimonas sp. 1936159 Bacteria Bacteria 180 7.819999999999998e-41   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g6371 i0 96.33 51.9362745098039 109 4 97 0 4 112 1688644 1688536 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 10595 180 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
28812962 28812962 PRJNA492280_P_NODE_33328_length_150_cov_4.141593_g33221_i0 PRJNA492280 33328 150 4.141593 6.2123895 Armatimonadota bacterium 2033014 Bacteria Bacteria 70.1 2.4e-12   NR MES2462405.1 2033014 g33221 i0 66.7 1.08 54 13 98 1 4 150 297 350 MES2462405.1 hypothetical protein [Armatimonadota bacterium] diamond 162 70.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;