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contig_metadata

9 rows where bioproject = "PRJNA492280", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA492280 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
451927 451927 PRJNA492280_P_NODE_11901_length_164_cov_7.858268_g11794_i0 PRJNA492280 11901 164 7.858268 12.88755952 Phytocercomonas venanatans 2065209 SAR_Eukaryotes SAR_Eukaryotes 71.3 3.78e-8   NTclustered gi|1315527750|gb|MF034900.1| 2065209 g11794 i0 88.525 0.371951219512195 61 3 36 4 1 59 9701 9643 Phytocercomonas venanatans 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 61 71.3 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Phytocercomonas Phytocercomonas venanatans
452214 452214 PRJNA492280_P_NODE_6821_length_199_cov_6.709877_g6714_i0 PRJNA492280 6821 199 6.709877 13.35265523 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 274 3.3899999999999997e-69   NTclustered gi|290760486|gb|GQ144689.1| 361427 g6714 i0 92.228 18.9698492462312 193 15 97 0 5 197 1804 1996 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 3775 274 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
2374386 2374386 PRJNA492280_P_NODE_2042_length_319_cov_11.421986_g1935_i0 PRJNA492280 2042 319 11.421986 36.43613534 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 418 2.559999999999999e-112   NTclustered gi|33309639|gb|AF411276.1| 188950 g1935 i0 99.138 92.6739811912226 232 2 95 0 4 235 780 1011 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 29563 418 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4278953 4278953 PRJNA492280_P_NODE_14564_length_164_cov_4.763780_g14457_i0 PRJNA492280 14564 164 4.76378 7.8125992 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 128 2.21e-25   NTclustered gi|238617605|gb|FJ973380.1| 45107 g14457 i0 97.368 53.0914634146341 76 1 46 1 89 164 2812 2738 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 8707 128 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
4279049 4279049 PRJNA492280_P_NODE_25824_length_164_cov_2.346457_g25717_i0 PRJNA492280 25824 164 2.346457 3.84818948 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 141 2.84e-29   NTclustered gi|300676732|gb|GQ377662.1| 188950 g25717 i0 100 27.640243902439 76 0 91 0 1 76 890 815 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 4533 141 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5555738 5555738 PRJNA492280_P_NODE_7405_length_192_cov_14.974194_g7298_i0 PRJNA492280 7405 192 14.974194 28.75045248 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 348 1.88e-91   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7298 i0 100 43.9947916666667 188 0 98 0 4 191 1910 1723 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8447 348 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9380002 9380002 PRJNA492280_P_NODE_6008_length_210_cov_4.398844_g5901_i0 PRJNA492280 6008 210 4.398844 9.2375724 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 375 9.63e-100   NTclustered gi|224996436|gb|FJ654268.1| 188950 g5901 i0 100 84.2095238095238 203 0 97 0 4 206 517 719 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17684 375 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14480736 14480736 PRJNA492280_P_NODE_5272_length_222_cov_13.016216_g5165_i0 PRJNA492280 5272 222 13.016216 28.89599952 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 399 6.099999999999999e-107   NTclustered gi|238617602|gb|FJ973377.1| 188950 g5165 i0 99.543 65.0990990990991 219 1 99 0 4 222 2674 2892 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 14452 399 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19577697 19577697 PRJNA492280_P_NODE_1296_length_387_cov_22.434286_g1196_i0 PRJNA492280 1296 387 22.434286 86.82068682 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 704 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1196 i0 100 21.0826873385013 381 0 98 0 4 384 350 730 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 8159 704 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;