RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA492280", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA492280 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13205796 13205796 PRJNA492280_P_NODE_31731_length_151_cov_2.824561_g31624_i0 PRJNA492280 31731 151 2.824561 4.26508711 Theileria sinensis 463198 SAR_Eukaryotes SAR_Eukaryotes 71.3 3.4e-8   NTclustered gi|1013181556|gb|KT819646.1| 463198 g31624 i0 83.784 0.490066225165563 74 12 49 0 78 151 448 521 Theileria sinensis strain Weiyuan ribosomal protein S5 (RPS5) gene, partial cds blastn 74 71.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria sinensis
26617574 26617574 PRJNA492280_P_NODE_21841_length_164_cov_3.000000_g21734_i0 PRJNA492280 21841 164 3 4.92 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 41.6 0.0336   NR XP_013250559.1 5801 g21734 i0 48.7 2.3780487804878 39 20 71.3 0 45 161 1114 1152 XP_013250559.1 hypothetical protein EAH_00010500, partial [Eimeria acervulina] diamond 390 42 0.990476190476191 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;