RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA492280" and tax_clade = "Luna-1 subcluster"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 3 ✖

bioproject 1

  • PRJNA492280 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8105127 8105127 PRJNA492280_P_NODE_25627_length_164_cov_2.417323_g25520_i0 PRJNA492280 25627 164 2.417323 3.96440972 Rhodoluna lacicola 529884 Bacteria Bacteria 111 2.23e-20   NTclustered gi|649018083|gb|CP007490.1| 529884 g25520 i0 93.333 32.9024390243902 75 5 46 0 90 164 1250243 1250169 Rhodoluna lacicola strain MWH-Ta8 chromosome, complete genome blastn 5396 111 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna lacicola
22128558 22128558 PRJNA492280_P_NODE_898_length_462_cov_14.734118_g803_i0 PRJNA492280 898 462 14.734118 68.07162516 Aquiluna borgnonia 2499157 Bacteria Bacteria 377 6.52e-100   NTclustered gi|1850312474|gb|CP054056.1| 2499157 g803 i0 93.676 143.075757575758 253 15 70 1 115 366 854618 854870 Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome blastn 66101 377 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna borgnonia
31024316 31024316 PRJNA492280_P_NODE_30255_length_151_cov_4.578947_g30148_i0 PRJNA492280 30255 151 4.578947 6.91420997 Rhodoluna sp. 1969481 Bacteria Bacteria 79.7 8.41e-16   NR MBJ7280603.1 1969481 g30148 i0 71.9 1.27152317880795 64 3 97.4 1 148 2 49 112 MBJ7280603.1 serine/threonine-protein phosphatase [Rhodoluna sp.] diamond 192 79.7 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;