contig_metadata
9 rows where bioproject = "PRJNA492280", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7476856 | 7476856 | PRJNA492280_P_NODE_18906_length_164_cov_3.519685_g18799_i0 | PRJNA492280 | 18906 | 164 | 3.519685 | 5.7722834 | Gemmatimonas | 173479 | Bacteria | Bacteria | 135 | 1.32e-27 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g18799 | i0 | 100 | 11.3353658536585 | 73 | 0 | 45 | 0 | 90 | 162 | 401 | 473 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 1859 | 135 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 9379746 | 9379746 | PRJNA492280_P_NODE_15068_length_164_cov_4.559055_g14961_i0 | PRJNA492280 | 15068 | 164 | 4.559055 | 7.4768502 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 158 | 2.82e-34 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g14961 | i0 | 81.761 | 0.969512195121951 | 159 | 27 | 96 | 1 | 4 | 160 | 3114717 | 3114559 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 159 | 158 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 10655623 | 10655623 | PRJNA492280_P_NODE_16689_length_164_cov_4.039370_g16582_i0 | PRJNA492280 | 16689 | 164 | 4.03937 | 6.6245668 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 145 | 2.2000000000000002e-30 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g16582 | i0 | 82.099 | 11.5487804878049 | 162 | 22 | 98 | 2 | 1 | 161 | 1102951 | 1102796 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 1894 | 145 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 20225376 | 20225376 | PRJNA492280_P_NODE_24376_length_164_cov_2.677165_g24269_i0 | PRJNA492280 | 24376 | 164 | 2.677165 | 4.3905506 | Gemmatimonas | 173479 | Bacteria | Bacteria | 115 | 1.72e-21 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g24269 | i0 | 94.595 | 13.6036585365854 | 74 | 4 | 45 | 0 | 89 | 162 | 2786 | 2859 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 2231 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 23404434 | 23404434 | PRJNA492280_P_NODE_6459_length_204_cov_5.221557_g6352_i0 | PRJNA492280 | 6459 | 204 | 5.221557 | 10.65197628 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 270 | 4.5099999999999985e-68 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g6352 | i0 | 90.769 | 18.4852941176471 | 195 | 15 | 96 | 1 | 4 | 198 | 2075979 | 2076170 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 3771 | 270 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 24677940 | 24677940 | PRJNA492280_P_NODE_14800_length_164_cov_4.669291_g14693_i0 | PRJNA492280 | 14800 | 164 | 4.669291 | 7.65763724 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 102 | 1.34e-17 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g14693 | i0 | 92.958 | 6.57317073170732 | 71 | 4 | 43 | 1 | 1 | 70 | 2576544 | 2576474 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 1078 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 28513573 | 28513573 | PRJNA492280_P_NODE_30607_length_151_cov_4.017544_g30500_i0 | PRJNA492280 | 30607 | 151 | 4.017544 | 6.06649144 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 80.5 | 5.03e-16 | NR | MDH3290884.1 | 2026742 | g30500 | i0 | 59.7 | 9.85430463576159 | 62 | 12 | 97.4 | 1 | 149 | 3 | 254 | 315 | MDH3290884.1 glycoside hydrolase family 3 C-terminal domain-containing protein [Gemmatimonadota bacterium] | diamond | 1488 | 80.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29113567 | 29113567 | PRJNA492280_P_NODE_33308_length_150_cov_4.176991_g33201_i0 | PRJNA492280 | 33308 | 150 | 4.176991 | 6.2654865 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 59.3 | 1.03e-8 | NR | NNE09753.1 | 2026742 | g33201 | i0 | 57.4 | 1.88 | 47 | 20 | 94 | 0 | 4 | 144 | 19 | 65 | NNE09753.1 VOC family protein [Gemmatimonadota bacterium] | diamond | 282 | 59.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30282350 | 30282350 | PRJNA492280_P_NODE_16172_length_164_cov_4.181102_g16065_i0 | PRJNA492280 | 16172 | 164 | 4.181102 | 6.85700728 | Gemmatimonas | 173479 | Bacteria | Bacteria | 48.1 | 1.61e-4 | NR | WP_373069465.1 | 1962908 | g16065 | i0 | 95.8 | 2.19512195121951 | 24 | 1 | 43.9 | 0 | 89 | 160 | 1189 | 1212 | WP_373069465.1 cell surface protein SprA [Gemmatimonas sp.] | diamond | 360 | 48.5 | 0.991752577319588 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;