RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA492280", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 4 ✖

tax_clade 1

  • Amoebozoa · 4 ✖

bioproject 1

  • PRJNA492280 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3650065 3650065 PRJNA492280_P_NODE_26603_length_163_cov_5.404762_g26496_i0 PRJNA492280 26603 163 5.404762 8.80976206 Physariida 5789 Evosea other_Eukaryota 139 1.01e-28   NTclustered gi|3221|emb|V01159.1| 5791 g26496 i0 100 44.8282208588957 75 0 92 0 1 75 1839 1765 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 7307 139 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
6829468 6829468 PRJNA492280_P_NODE_15706_length_164_cov_4.338583_g15599_i0 PRJNA492280 15706 164 4.338583 7.11527612 Dianema subretisporum 1182205 Evosea other_Eukaryota 117 4.79e-22   NTclustered gi|2250222329|gb|ON713412.1| 1182205 g15599 i0 95.833 45.4939024390244 72 3 44 0 4 75 489 560 Dianema subretisporum voucher MM31413 small subunit ribosomal RNA gene, partial sequence blastn 7461 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Dianemataceae Dianema Dianema subretisporum
24050845 24050845 PRJNA492280_P_NODE_26919_length_163_cov_3.293651_g26812_i0 PRJNA492280 26919 163 3.293651 5.36865113 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 104 3.7e-18   NTclustered gi|2687|emb|X60210.1| 5793 g26812 i0 92.958 4.77914110429448 71 5 44 0 6 76 1398 1468 D.iridis LSU rRNA gene blastn 779 104 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
32699948 32699948 PRJNA492280_P_NODE_31260_length_151_cov_3.298246_g31153_i0 PRJNA492280 31260 151 3.298246 4.98035146 Dictyostelium purpureum 5786 Evosea other_Eukaryota 60.5 5.91e-9   NR XP_003288546.1 5786 g31153 i0 47.1 1.39072847682119 70 16 97.4 1 148 2 177 246 XP_003288546.1 uncharacterized protein DICPUDRAFT_34242 [Dictyostelium purpureum] diamond 210 60.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;