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contig_metadata

22 rows where bioproject = "PRJNA489308" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA489308 · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
450225 450225 PRJNA489308_P_NODE_1_length_9248_cov_163.244578_g0_i0 PRJNA489308 1 9248 163.244578 15096.85857344 brine shrimp iflavirus 3 2900464 Viruses Viruses 16859 0   NTclustered gi|2209094758|gb|OL472451.1| 2900464 g0 i0 99.61 10.9972967128028 9238 35 99 1 1 9238 1 9237 MAG: Brine shrimp iflavirus 3 isolate KAZ/15-16 RNA-dependent RNA polymerase gene, complete cds blastn 101703 16859 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
1724808 1724808 PRJNA489308_P_NODE_14042_length_320_cov_1.242915_g13966_i0 PRJNA489308 14042 320 1.242915 3.977328 Cotonvirus japonicum 3059904 Viruses Viruses 52.8 0.03   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g13966 i0 96.774 0.096875 31 1 10 0 9 39 1266203 1266173 Cotonvirus japonicus DNA, complete genome blastn 31 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
3000795 3000795 PRJNA489308_P_NODE_10423_length_351_cov_3.737410_g10347_i0 PRJNA489308 10423 351 3.73741 13.1183091 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 62.1 5.51e-5   NTclustered gi|2214231579|gb|OM622281.1| 3003959 g10347 i0 86.207 0.501424501424501 58 6 16 2 157 213 8912 8856 MAG: Picornavirales sp. isolate HPLV-26 genomic sequence blastn 176 62.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
4277337 4277337 PRJNA489308_P_NODE_404_length_1223_cov_43.285217_g366_i0 PRJNA489308 404 1223 43.285217 529.37820391 Phoenicopteridae parvo-like hybrid virus 2794528 Viruses Viruses 596 1.1799999999999996e-211   NR QTE03744.1 2794528 g366 i0 71.4 1.88879803761243 388 110 95.2 1 18 1181 1 387 QTE03744.1 MAG: replication protein [Phoenicopteridae parvo-like hybrid virus] diamond 2310 596 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopteridae parvo-like hybrid virus
5553844 5553844 PRJNA489308_P_NODE_38825_length_241_cov_0.916667_g38749_i0 PRJNA489308 38825 241 0.916667 2.20916747 Escherichia phage mEp013 3121468 Viruses Viruses 52.8 0.022   NTclustered gi|2691724853|gb|PP180002.1| 3121468 g38749 i0 100 0.116182572614108 28 0 12 0 147 174 50181 50208 Escherichia phage mEp013, complete genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Escherichia phage mEp013
6201245 6201245 PRJNA489308_P_NODE_3485_length_538_cov_6.440860_g3409_i0 PRJNA489308 3485 538 6.44086 34.6518268 root 1 Root_unresolved Root_unresolved 56.5 0.004   NTclustered gi|2293615484|gb|OP072807.1| 38018 g3409 i0 100 0.769516728624535 30 0 6 0 195 224 80172 80201 MAG: Bacteriophage sp. isolate 3938_66698, partial genome blastn 414 56.5 1 Viruses               Bacteriophage sp.
9378042 9378042 PRJNA489308_P_NODE_33108_length_248_cov_0.880000_g33032_i0 PRJNA489308 33108 248 0.88 2.1824 Sclerotinia sclerotiorum fusarivirus 2 2822941 Viruses Viruses 422 1.48e-113   NTclustered gi|2029278261|gb|MT646393.1| 2822941 g33032 i0 97.561 2.13306451612903 246 6 99 0 3 248 6179 5934 MAG: Sclerotinia sclerotiorum fusarivirus 2, partial genome blastn 529 422 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Sclerotinia sclerotiorum fusarivirus 2
9378102 9378102 PRJNA489308_P_NODE_4448_length_490_cov_2.985612_g4372_i0 PRJNA489308 4448 490 2.985612 14.6294988 Marine virus AFVG_250M428 2693597 Viruses Viruses 52.8 0.048   NTclustered gi|1789809847|gb|MN694203.1| 2693597 g4372 i0 100 0.0571428571428571 28 0 6 0 104 131 19701 19674 MAG: Marine virus AFVG_250M428, complete genome blastn 28 52.8 1 Viruses Marine virus AFVG             Marine virus AFVG_250M428
10026405 10026405 PRJNA489308_P_NODE_36468_length_244_cov_0.900585_g36392_i0 PRJNA489308 36468 244 0.900585 2.1974274 Viruses 10239 Viruses Viruses 58.4 4.73e-4   NTclustered gi|1780386545|gb|MK978772.1| 2682469 g36392 i0 94.737 0.840163934426229 38 1 15 1 201 237 260218 260181 Moumouvirus maliensis, complete genome blastn 205 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'maliensis'
17027434 17027434 PRJNA489308_P_NODE_214_length_1473_cov_66.962857_g184_i0 PRJNA489308 214 1473 66.962857 986.36288361 Psittacidae aveparvovirus 2794556 Viruses Viruses 285 1.74e-86   NR QTE03752.1 2794556 g184 i0 45.3 1.5050916496945 369 187 73.5 9 1110 28 165 526 QTE03752.1 MAG: hypothetical protein [Psittacidae aveparvovirus] diamond 2217 285 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus
17675757 17675757 PRJNA489308_P_NODE_31754_length_250_cov_0.870056_g31678_i0 PRJNA489308 31754 250 0.870056 2.17514 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 147 4.96e-39   NR CAK7597324.1 3072188 g31678 i0 83.1 1.968 83 14 99.6 0 250 2 272 354 CAK7597324.1 Vesicle-fusing ATPase [Catovirus sp. 'naegleriensis'] diamond 492 147 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
21499981 21499981 PRJNA489308_P_NODE_35777_length_245_cov_0.895349_g35701_i0 PRJNA489308 35777 245 0.895349 2.19360505 Fadolivirus algeromassiliense 3060017 Viruses Viruses 109 5.4e-26   NR YP_010803343.1 3060017 g35701 i0 72.8 1.98367346938776 81 22 99.2 0 243 1 216 296 YP_010803343.1 inosine-5'-monophosphate dehydrogenase [Fadolivirus algeromassiliense] diamond 486 109 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
23402471 23402471 PRJNA489308_P_NODE_26079_length_264_cov_1.664921_g26003_i0 PRJNA489308 26079 264 1.664921 4.39539144 Siphoviridae sp. ct8eQ1 2826171 Viruses Viruses 52.8 0.024   NTclustered gi|2051100442|tpg|BK015025.1| 2826171 g26003 i0 100 0.106060606060606 28 0 11 0 211 238 30141 30114 MAG TPA_asm: Siphoviridae sp. ct8eQ1, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ct8eQ1
23402540 23402540 PRJNA489308_P_NODE_37439_length_242_cov_4.491124_g37363_i0 PRJNA489308 37439 242 4.491124 10.86852008 Sclerotinia sclerotiorum mitovirus 42 2879888 Viruses Viruses 110 1.28e-19   NTclustered gi|2132909481|gb|MW454891.1| 2879888 g37363 i0 93.243 0.305785123966942 74 5 31 0 112 185 3066 3139 Sclerotinia sclerotiorum mitovirus 42 isolate GB&PB-4 RNA-dependent RNA polymerase gene, complete cds blastn 74 110 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sclerotinia sclerotiorum mitovirus 42
27392570 27392570 PRJNA489308_P_NODE_25303_length_267_cov_1.360825_g25227_i0 PRJNA489308 25303 267 1.360825 3.63340275 Lonomia obliqua multiple nucleopolyhedrovirus 134394 Viruses Viruses 52.4 1.69e-5   NR YP_009666434.1 134394 g25227 i0 38.2 0.853932584269663 76 43 85.4 1 39 266 189 260 YP_009666434.1 Inhibitor of apoptosis 2 [Lonomia obliqua multiple nucleopolyhedrovirus] diamond 228 52.4 1 Viruses       Naldaviricetes Lefavirales Baculoviridae Alphabaculovirus Alphabaculovirus lonobliquae
27645237 27645237 PRJNA489308_P_NODE_30304_length_252_cov_1.290503_g30228_i0 PRJNA489308 30304 252 1.290503 3.25206756 Chuvivirus 2842604 Viruses Viruses 115 7.33e-28   NR UVF58769.1 2842604 g30228 i0 60.7 3 84 33 100 0 1 252 337 420 UVF58769.1 MAG: S protein [Salarius guttatus piscichuvirus] diamond 756 115 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Chuvivirus
27676852 27676852 PRJNA489308_P_NODE_15504_length_310_cov_1.565401_g15428_i0 PRJNA489308 15504 310 1.565401 4.8527431 Fadolivirus algeromassiliense 3060017 Viruses Viruses 116 1.9000000000000003e-28   NR YP_010803269.1 3060017 g15428 i0 49.5 0.996774193548387 103 52 99.7 0 1 309 277 379 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 309 116 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
27708620 27708620 PRJNA489308_P_NODE_38064_length_242_cov_0.911243_g37988_i0 PRJNA489308 38064 242 0.911243 2.20520806 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 72.8 9.8e-13   NR WLN26256.1 2951531 g37988 i0 43 0.979338842975207 79 45 97.9 0 238 2 132 210 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 237 72.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus
28766053 28766053 PRJNA489308_P_NODE_10527_length_350_cov_2.072202_g10451_i0 PRJNA489308 10527 350 2.072202 7.252707 Megaviricetes 2732523 Viruses Viruses 92.8 3.5e-19   NR YP_007676312.1 755272 g10451 i0 45.7 6.96 116 54 99.4 1 1 348 231 337 YP_007676312.1 heat shock protein 70 [Micromonas pusilla virus 12T] diamond 2436 92.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Micromonas pusilla virus 12T
28939676 28939676 PRJNA489308_P_NODE_12848_length_329_cov_1.203125_g12772_i0 PRJNA489308 12848 329 1.203125 3.95828125 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 75.1 4.24e-13   NR YP_009448666.1 2023057 g12772 i0 52.8 0.984802431610942 108 51 98.5 0 328 5 277 384 YP_009448666.1 Flotillin domain-containing protein [Orpheovirus IHUMI-LCC2] diamond 324 75.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
29286754 29286754 PRJNA489308_P_NODE_26669_length_262_cov_2.037037_g26593_i0 PRJNA489308 26669 262 2.037037 5.33703694 Fadolivirus algeromassiliense 3060017 Viruses Viruses 67 1.88e-11   NR YP_010804033.1 3060017 g26593 i0 42.4 0.973282442748092 85 49 97.3 0 2 256 61 145 YP_010804033.1 mitochondrial 18kda protein [Fadolivirus algeromassiliense] diamond 255 67 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
31941139 31941139 PRJNA489308_P_NODE_33337_length_248_cov_0.880000_g33261_i0 PRJNA489308 33337 248 0.88 2.1824 Erwinia phage vB_EamM_Kwan 1883374 Viruses Viruses 44.3 0.0108   NR YP_009278638.1 1883374 g33261 i0 32.3 0.786290322580645 65 44 78.6 0 48 242 37 101 YP_009278638.1 hypothetical protein BIZ80_gp266 [Erwinia phage vB_EamM_Kwan] diamond 195 44.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Chimalliviridae Wellingtonvirus Wellingtonvirus wellington

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;