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contig_metadata

34 rows where bioproject = "PRJNA489308" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA489308 · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1724949 1724949 PRJNA489308_P_NODE_32782_length_248_cov_1.760000_g32706_i0 PRJNA489308 32782 248 1.76 4.3648 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 115 2.82e-21   NTclustered gi|2318753592|ref|XM_051218857.1| 6185 g32706 i0 82.443 2.06854838709677 131 23 53 0 18 148 137 7 Schistosoma haematobium Ras- protein Rab-2A, variant 2 (RAB2A_1), mRNA blastn 513 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
3000917 3000917 PRJNA489308_P_NODE_23243_length_274_cov_1.532338_g23167_i0 PRJNA489308 23243 274 1.532338 4.19860612 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|687572767|emb|LK586392.1| 57078 g23167 i0 100 0.102189781021898 28 0 10 0 52 79 310 337 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0178600 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
3649224 3649224 PRJNA489308_P_NODE_3923_length_515_cov_3.004525_g3847_i0 PRJNA489308 3923 515 3.004525 15.47330375 Metazoa 33208 Platyhelminthes Platyhelminthes 56.5 0.004   NTclustered gi|2318769140|ref|XM_051208202.1| 6185 g3847 i0 92.5 0.351456310679612 40 2 8 1 278 316 8590 8629 Schistosoma haematobium plexin b1 (PLXNB3), mRNA blastn 181 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
4277343 4277343 PRJNA489308_P_NODE_4224_length_500_cov_2.016393_g4148_i0 PRJNA489308 4224 500 2.016393 10.081965 Opisthokonta 33154 Platyhelminthes Platyhelminthes 239 1.44e-74   NR VDD83331.1 53468 g4148 i0 70.5 48.54 166 49 99.6 0 2 499 139 304 VDD83331.1 unnamed protein product, partial [Mesocestoides corti] diamond 24270 240 0.995833333333333 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
5553819 5553819 PRJNA489308_P_NODE_35325_length_245_cov_1.343023_g35249_i0 PRJNA489308 35325 245 1.343023 3.29040635 Plagiorchiida 27871 Platyhelminthes Platyhelminthes 103 6.01e-26   NR THD26194.1 6192 g35249 i0 71.9 3.89387755102041 64 18 78.4 0 44 235 95 158 THD26194.1 Protein RER1 [Fasciola hepatica] diamond 954 103 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
9377921 9377921 PRJNA489308_P_NODE_1688_length_724_cov_5.276498_g1614_i0 PRJNA489308 1688 724 5.276498 38.20184552 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.02   NTclustered gi|687166736|emb|LN056594.1| 99802 g1614 i0 96.875 0.0441988950276243 32 1 4 0 291 322 2728 2759 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0054930 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
10653728 10653728 PRJNA489308_P_NODE_1069_length_869_cov_26.129397_g1010_i0 PRJNA489308 1069 869 26.129397 227.06445993 Fasciolopsis buskii 27845 Platyhelminthes Platyhelminthes 246 1.37e-78   NR KAA0196388.1 27845 g1010 i0 68.8 1.78826237054085 173 54 59.7 0 770 252 4 176 KAA0196388.1 Ribosomal protein L11 [Fasciolopsis buskii] diamond 1554 246 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
13204006 13204006 PRJNA489308_P_NODE_5831_length_439_cov_27.721311_g5755_i0 PRJNA489308 5831 439 27.721311 121.69655529 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 730 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g5755 i0 96.804 0.997722095671982 438 13 99 1 2 439 449 13 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 438 730 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
13851746 13851746 PRJNA489308_P_NODE_3131_length_562_cov_5.748466_g3055_i0 PRJNA489308 3131 562 5.748466 32.30637892 Opisthokonta 33154 Platyhelminthes Platyhelminthes 54.7 0.015   NTclustered gi|1084294672|ref|XM_018796201.1| 6183 g3055 i0 100 0.108540925266904 29 0 5 0 286 314 1200 1172 Schistosoma mansoni putative serine-rich repeat protein partial mRNA blastn 61 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
14478899 14478899 PRJNA489308_P_NODE_5732_length_443_cov_1.216216_g5656_i0 PRJNA489308 5732 443 1.216216 5.38783688 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 199 9.74e-60   NR THD19671.1 6192 g5656 i0 66.9 121.65237020316 145 48 98.2 0 435 1 121 265 THD19671.1 Eukaryotic peptide chain release factor subunit [Fasciola hepatica] diamond 53892 201 0.990049751243781 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
17027571 17027571 PRJNA489308_P_NODE_3974_length_512_cov_2.624146_g3898_i0 PRJNA489308 3974 512 2.624146 13.43562752 Metazoa 33208 Platyhelminthes Platyhelminthes 179 4.669999999999999e-55   NR THD19570.1 6192 g3898 i0 75.9 1.2890625 108 26 63.3 0 461 138 2 109 THD19570.1 peptidyl-prolyl cis-trans isomerase FKBP1B [Fasciola hepatica] diamond 660 180 0.994444444444444 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
19576048 19576048 PRJNA489308_P_NODE_35936_length_244_cov_1.801170_g35860_i0 PRJNA489308 35936 244 1.80117 4.3948548 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 311 3.29e-80   NTclustered gi|68479954|gb|DQ076149.1| 6182 g35860 i0 89.712 0.995901639344262 243 25 99 0 2 244 259 17 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 243 311 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
20224525 20224525 PRJNA489308_P_NODE_4956_length_470_cov_2.876574_g4880_i0 PRJNA489308 4956 470 2.876574 13.5198978 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 134 2.74e-36   NR CAL5131684.1 300641 g4880 i0 65.3 0.606382978723404 95 32 60 1 2 283 96 190 CAL5131684.1 unnamed protein product [Calicophoron daubneyi] diamond 285 134 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
20851759 20851759 PRJNA489308_P_NODE_16977_length_301_cov_2.026316_g16901_i0 PRJNA489308 16977 301 2.026316 6.09921116 Stenostomum brevipharyngium 2880247 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|2569237561|gb|OR036964.1| 2880247 g16901 i0 86.538 0.471760797342193 52 6 17 1 150 201 600 550 Stenostomum brevipharyngium EmxB mRNA, complete cds blastn 142 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum brevipharyngium
22126744 22126744 PRJNA489308_P_NODE_4758_length_477_cov_3.757426_g4682_i0 PRJNA489308 4758 477 3.757426 17.92292202 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 52.8 0.046   NTclustered gi|1373862610|ref|XM_024497682.1| 6210 g4682 i0 100 0.0587002096436059 28 0 6 0 440 467 782 809 Echinococcus granulosus hypothetical protein (EGR_08433), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
22126745 22126745 PRJNA489308_P_NODE_4778_length_477_cov_1.727723_g4702_i0 PRJNA489308 4778 477 1.727723 8.24123871 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.004   NTclustered gi|690651554|emb|LN199479.1| 99802 g4702 i0 100 2.82389937106918 30 0 6 0 55 84 1753 1724 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0170110 blastn 1347 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
26649059 26649059 PRJNA489308_P_NODE_21381_length_281_cov_2.105769_g21305_i0 PRJNA489308 21381 281 2.105769 5.91721089 Metazoa 33208 Platyhelminthes Platyhelminthes 62 2.04e-10   NR KAF8567992.1 34504 g21305 i0 48.2 3.99288256227758 56 29 59.8 0 35 202 3 58 KAF8567992.1 hypothetical protein P879_08430 [Paragonimus westermani] diamond 1122 62.4 0.993589743589744 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani
27297601 27297601 PRJNA489308_P_NODE_15783_length_308_cov_2.791489_g15707_i0 PRJNA489308 15783 308 2.791489 8.59778612 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 132 3.4399999999999996e-35   NR XP_018647491.1 6183 g15707 i0 57.6 6.31168831168831 99 40 96.4 1 2 298 201 297 XP_018647491.1 cathepsin B-like peptidase (C01 family) [Schistosoma mansoni] diamond 1944 132 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
27708624 27708624 PRJNA489308_P_NODE_40324_length_230_cov_2.853503_g40248_i0 PRJNA489308 40324 230 2.853503 6.5630569 Taenia asiatica 60517 Platyhelminthes Platyhelminthes 91.7 2.06e-21   NR VDK33679.1 60517 g40248 i0 56.5 6.09130434782609 69 30 90 0 208 2 22 90 VDK33679.1 unnamed protein product [Taenia asiatica] diamond 1401 91.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica
27897463 27897463 PRJNA489308_P_NODE_12145_length_334_cov_3.126437_g12069_i0 PRJNA489308 12145 334 3.126437 10.44229958 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 55.5 3.43e-6   NR PAA86220.1 282301 g12069 i0 38.2 2.38922155688623 68 42 61.1 0 3 206 169 236 PAA86220.1 hypothetical protein BOX15_Mlig009159g3 [Macrostomum lignano] diamond 798 55.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28450601 28450601 PRJNA489308_P_NODE_9726_length_360_cov_1.390244_g9650_i0 PRJNA489308 9726 360 1.390244 5.0048784 Metazoa 33208 Platyhelminthes Platyhelminthes 62 2.57e-8   NR KAF8566374.1 34504 g9650 i0 68.3 2.19166666666667 41 13 34.2 0 4 126 700 740 KAF8566374.1 hypothetical protein P879_04989 [Paragonimus westermani] diamond 789 62 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani
28576672 28576672 PRJNA489308_P_NODE_9067_length_369_cov_1.000000_g8991_i0 PRJNA489308 9067 369 1 3.69 Taeniidae 6208 Platyhelminthes Platyhelminthes 81.3 7.63e-17   NR VDM18202.1 6205 g8991 i0 46.8 2.73170731707317 79 37 61.8 2 7 234 41 117 VDM18202.1 unnamed protein product [Hydatigera taeniaeformis] diamond 1008 81.6 0.996323529411765 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
28892234 28892234 PRJNA489308_P_NODE_21368_length_281_cov_2.259615_g21292_i0 PRJNA489308 21368 281 2.259615 6.34951815 Opisthokonta 33154 Platyhelminthes Platyhelminthes 88.2 5.5e-19   NR VDL93792.1 70667 g21292 i0 51.7 4.92170818505338 87 29 92.9 2 19 279 122 195 VDL93792.1 unnamed protein product [Schistocephalus solidus] diamond 1383 89 0.991011235955056 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
30060630 30060630 PRJNA489308_P_NODE_19411_length_289_cov_2.662037_g19335_i0 PRJNA489308 19411 289 2.662037 7.69328693 Schistosoma 6181 Platyhelminthes Platyhelminthes 84.3 1.49e-16   NR CAH8819513.1 6186 g19335 i0 38 7.6401384083045 92 57 95.5 0 287 12 334 425 CAH8819513.1 unnamed protein product [Schistosoma curassoni] diamond 2208 84.7 0.995277449822904 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma curassoni
30471682 30471682 PRJNA489308_P_NODE_6633_length_416_cov_2.408163_g6557_i0 PRJNA489308 6633 416 2.408163 10.01795808 Metazoa 33208 Platyhelminthes Platyhelminthes 69.7 1.03e-10   NR KAF5405683.1 100268 g6557 i0 35.9 4.62259615384615 103 61 71.4 3 38 334 988 1089 KAF5405683.1 hypothetical protein PHET_00711 [Paragonimus heterotremus] diamond 1923 69.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus heterotremus
30819139 30819139 PRJNA489308_P_NODE_27534_length_260_cov_1.235294_g27458_i0 PRJNA489308 27534 260 1.235294 3.2117644 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 94.7 2.35e-20   NR VUZ43038.1 6216 g27458 i0 53 10.3153846153846 83 34 92.3 2 3 242 593 673 VUZ43038.1 unnamed protein product, partial [Hymenolepis diminuta] diamond 2682 95.5 0.991623036649215 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
31103312 31103312 PRJNA489308_P_NODE_10015_length_356_cov_1.773852_g9939_i0 PRJNA489308 10015 356 1.773852 6.31491312 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 172 4.01e-47   NR CAH8567966.1 57078 g9939 i0 76.5 8.02247191011236 119 27 99.4 1 3 356 585 703 CAH8567966.1 unnamed protein product [Dicrocoelium dendriticum] diamond 2856 172 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
31166334 31166334 PRJNA489308_P_NODE_33975_length_247_cov_0.885057_g33899_i0 PRJNA489308 33975 247 0.885057 2.18609079 Metazoa 33208 Platyhelminthes Platyhelminthes 89 2.15e-18   NR CDS16001.1 6210 g33899 i0 50.6 13.7732793522267 81 39 97.2 1 8 247 778 858 CDS16001.1 eukaryotic translation initiation factor [Echinococcus granulosus] diamond 3402 89 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
31451376 31451376 PRJNA489308_P_NODE_18076_length_296_cov_1.219731_g18000_i0 PRJNA489308 18076 296 1.219731 3.61040376 Metazoa 33208 Platyhelminthes Platyhelminthes 65.5 4.24e-10   NR CAH8671007.1 6185 g18000 i0 49 7.04391891891892 51 26 51.7 0 1 153 219 269 CAH8671007.1 unnamed protein product [Schistosoma haematobium] diamond 2085 65.9 0.993930197268589 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
31735732 31735732 PRJNA489308_P_NODE_25637_length_265_cov_4.328125_g25561_i0 PRJNA489308 25637 265 4.328125 11.46953125 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.8 1.65e-5   NR PAA82696.1 282301 g25561 i0 29.4 5.02641509433962 85 57 96.2 1 257 3 5 86 PAA82696.1 hypothetical protein BOX15_Mlig024657g1, partial [Macrostomum lignano] diamond 1332 50.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
31862244 31862244 PRJNA489308_P_NODE_36957_length_243_cov_1.358824_g36881_i0 PRJNA489308 36957 243 1.358824 3.30194232 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 79.7 2.72e-16   NR VDM18193.1 6205 g36881 i0 52.1 11.7283950617284 96 31 100 3 1 243 43 138 VDM18193.1 unnamed protein product, partial [Hydatigera taeniaeformis] diamond 2850 80.1 0.995006242197254 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
32067759 32067759 PRJNA489308_P_NODE_29898_length_253_cov_1.422222_g29822_i0 PRJNA489308 29898 253 1.422222 3.59822166 Hymenolepis diminuta 6216 Platyhelminthes Platyhelminthes 46.2 0.00222   NR VDL19304.1 6216 g29822 i0 48.9 0.557312252964427 47 24 55.7 0 231 91 187 233 VDL19304.1 unnamed protein product [Hymenolepis diminuta] diamond 141 46.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
32162951 32162951 PRJNA489308_P_NODE_10798_length_347_cov_1.974453_g10722_i0 PRJNA489308 10798 347 1.974453 6.85135191 Schistosoma rodhaini 6188 Platyhelminthes Platyhelminthes 47 0.00347   NR CAH8680824.1 6188 g10722 i0 40.3 3.13832853025937 62 34 53.6 2 330 145 200 258 CAH8680824.1 unnamed protein product [Schistosoma rodhaini] diamond 1089 47 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma rodhaini
32258091 32258091 PRJNA489308_P_NODE_36058_length_244_cov_1.555556_g35982_i0 PRJNA489308 36058 244 1.555556 3.79555664 Fasciolopsis buskii 27845 Platyhelminthes Platyhelminthes 44.7 0.00703   NR KAA0189670.1 27845 g35982 i0 36.4 0.811475409836066 66 36 81.1 1 239 42 104 163 KAA0189670.1 Aquaporin 3 [Fasciolopsis buskii] diamond 198 44.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;