RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA489308", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA489308 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
450225 450225 PRJNA489308_P_NODE_1_length_9248_cov_163.244578_g0_i0 PRJNA489308 1 9248 163.244578 15096.85857344 brine shrimp iflavirus 3 2900464 Viruses Viruses 16859 0   NTclustered gi|2209094758|gb|OL472451.1| 2900464 g0 i0 99.61 10.9972967128028 9238 35 99 1 1 9238 1 9237 MAG: Brine shrimp iflavirus 3 isolate KAZ/15-16 RNA-dependent RNA polymerase gene, complete cds blastn 101703 16859 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
3000795 3000795 PRJNA489308_P_NODE_10423_length_351_cov_3.737410_g10347_i0 PRJNA489308 10423 351 3.73741 13.1183091 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 62.1 5.51e-5   NTclustered gi|2214231579|gb|OM622281.1| 3003959 g10347 i0 86.207 0.501424501424501 58 6 16 2 157 213 8912 8856 MAG: Picornavirales sp. isolate HPLV-26 genomic sequence blastn 176 62.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
9378042 9378042 PRJNA489308_P_NODE_33108_length_248_cov_0.880000_g33032_i0 PRJNA489308 33108 248 0.88 2.1824 Sclerotinia sclerotiorum fusarivirus 2 2822941 Viruses Viruses 422 1.48e-113   NTclustered gi|2029278261|gb|MT646393.1| 2822941 g33032 i0 97.561 2.13306451612903 246 6 99 0 3 248 6179 5934 MAG: Sclerotinia sclerotiorum fusarivirus 2, partial genome blastn 529 422 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Sclerotinia sclerotiorum fusarivirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;