RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA489308", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA489308 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26981385 26981385 PRJNA489308_P_NODE_12822_length_329_cov_1.390625_g12746_i0 PRJNA489308 12822 329 1.390625 4.57515625 Nitrososphaerota archaeon 2026795 Archaea Archaea 124 1.47e-32   NR MBI5698011.1 2026795 g12746 i0 55.5 2.99088145896657 110 47 98.5 1 328 5 25 134 MBI5698011.1 ammonium transporter [Nitrososphaerota archaeon] diamond 984 124 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31909672 31909672 PRJNA489308_P_NODE_24437_length_270_cov_1.451777_g24361_i0 PRJNA489308 24437 270 1.451777 3.9197979 Nitrososphaerota archaeon 2026795 Archaea Archaea 97.4 6.400000000000001e-22   NR MEM3062935.1 2026795 g24361 i0 53.3 2.01111111111111 90 39 100 2 1 270 186 272 MEM3062935.1 hypothetical protein [Nitrososphaerota archaeon] diamond 543 97.4 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32668478 32668478 PRJNA489308_P_NODE_9300_length_365_cov_3.089041_g9224_i0 PRJNA489308 9300 365 3.089041 11.27499965 Nitrososphaerota archaeon 2026795 Archaea Archaea 43.5 0.0487   NR MCH7648516.1 2026795 g9224 i0 24.7 0.698630136986301 85 58 69.9 1 318 64 16 94 MCH7648516.1 hypothetical protein [Nitrososphaerota archaeon] diamond 255 43.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;