RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA489308" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA489308 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6827782 6827782 PRJNA489308_P_NODE_28046_length_258_cov_1.794595_g27970_i0 PRJNA489308 28046 258 1.794595 4.6300551 Fungi 4751 Fungi Fungi 80.1 2.79e-15   NR PJF19253.1 1246581 g27970 i0 64.7 2.97674418604651 51 18 59.3 0 157 5 1 51 PJF19253.1 hypothetical protein PSACC_00935 [Paramicrosporidium saccamoebae] diamond 768 80.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
24676389 24676389 PRJNA489308_P_NODE_8700_length_374_cov_2.421927_g8624_i0 PRJNA489308 8700 374 2.421927 9.05800698 Eukaryota 2759 Fungi Fungi 178 9.71e-51   NR EPZ30990.1 988480 g8624 i0 71.8 6.96256684491979 124 35 99.5 0 374 3 362 485 EPZ30990.1 Acyl-CoA dehydrogenase/oxidase domain-containing protein [Rozella allomycis CSF55] diamond 2604 179 0.994413407821229 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26633163 26633163 PRJNA489308_P_NODE_11481_length_340_cov_26.576779_g11405_i0 PRJNA489308 11481 340 26.576779 90.3610486 Rozella allomycis CSF55 988480 Fungi Fungi 118 4.35e-30   NR EPZ30786.1 988480 g11405 i0 59.6 1.56176470588235 89 36 78.5 0 321 55 162 250 EPZ30786.1 Ribosomal protein L22/L17, eukaryotic/archaeal domain-containing protein [Rozella allomycis CSF55] diamond 531 118 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27092397 27092397 PRJNA489308_P_NODE_41222_length_200_cov_6.456693_g41146_i0 PRJNA489308 41222 200 6.456693 12.913386 Eukaryota 2759 Fungi Fungi 79 8.53e-16   NR EPZ34692.1 988480 g41146 i0 65.6 4.635 64 21 94.5 1 10 198 190 253 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 927 79.3 0.996216897856242 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
27107774 27107774 PRJNA489308_P_NODE_342_length_1296_cov_23.946034_g307_i0 PRJNA489308 342 1296 23.946034 310.34060064 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 284 2.46e-90   NR PJF16902.1 1246581 g307 i0 64 6.75925925925926 236 82 54.4 3 167 871 24 257 PJF16902.1 hypothetical protein PSACC_03283 [Paramicrosporidium saccamoebae] diamond 8760 284 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
28086943 28086943 PRJNA489308_P_NODE_17985_length_296_cov_1.784753_g17909_i0 PRJNA489308 17985 296 1.784753 5.28286888 Rozella allomycis CSF55 988480 Fungi Fungi 84.7 1.48e-18   NR EPZ33918.1 988480 g17909 i0 56 0.760135135135135 75 23 76 1 2 226 62 126 EPZ33918.1 Pre-mRNA branch site protein p14 [Rozella allomycis CSF55] diamond 225 84.7 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28276377 28276377 PRJNA489308_P_NODE_36606_length_243_cov_66.164706_g36530_i0 PRJNA489308 36606 243 66.164706 160.78023558 Rozella allomycis CSF55 988480 Fungi Fungi 82 1.01e-16   NR EPZ34692.1 988480 g36530 i0 66.2 3.87654320987654 65 21 79 1 23 214 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28402812 28402812 PRJNA489308_P_NODE_12586_length_331_cov_1.193798_g12510_i0 PRJNA489308 12586 331 1.193798 3.95147138 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 90.5 3.12e-19   NR PJF18475.1 1246581 g12510 i0 60.6 3.32628398791541 66 26 59.8 0 134 331 98 163 PJF18475.1 UMP-CMP kinase [Paramicrosporidium saccamoebae] diamond 1101 90.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
28718605 28718605 PRJNA489308_P_NODE_34007_length_247_cov_0.885057_g33931_i0 PRJNA489308 34007 247 0.885057 2.18609079 Rozella allomycis CSF55 988480 Fungi Fungi 43.1 0.0289   NR EPZ33152.1 988480 g33931 i0 42.6 0.57085020242915 47 27 57.1 0 153 13 561 607 EPZ33152.1 ABC transporter domain-containing protein [Rozella allomycis CSF55] diamond 141 43.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30139178 30139178 PRJNA489308_P_NODE_5652_length_445_cov_3.395161_g5576_i0 PRJNA489308 5652 445 3.395161 15.10846645 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 75.1 5.34e-13   NR PJF16516.1 1246581 g5576 i0 48.8 0.552808988764045 82 35 50.6 1 445 221 168 249 PJF16516.1 hypothetical protein PSACC_03723 [Paramicrosporidium saccamoebae] diamond 246 75.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;