RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA489308", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA489308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4277337 4277337 PRJNA489308_P_NODE_404_length_1223_cov_43.285217_g366_i0 PRJNA489308 404 1223 43.285217 529.37820391 Phoenicopteridae parvo-like hybrid virus 2794528 Viruses Viruses 596 1.1799999999999996e-211   NR QTE03744.1 2794528 g366 i0 71.4 1.88879803761243 388 110 95.2 1 18 1181 1 387 QTE03744.1 MAG: replication protein [Phoenicopteridae parvo-like hybrid virus] diamond 2310 596 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopteridae parvo-like hybrid virus
17027434 17027434 PRJNA489308_P_NODE_214_length_1473_cov_66.962857_g184_i0 PRJNA489308 214 1473 66.962857 986.36288361 Psittacidae aveparvovirus 2794556 Viruses Viruses 285 1.74e-86   NR QTE03752.1 2794556 g184 i0 45.3 1.5050916496945 369 187 73.5 9 1110 28 165 526 QTE03752.1 MAG: hypothetical protein [Psittacidae aveparvovirus] diamond 2217 285 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;