RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA489308", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA489308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28971164 28971164 PRJNA489308_P_NODE_20228_length_286_cov_1.446009_g20152_i0 PRJNA489308 20228 286 1.446009 4.13558574 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 44.3 0.0185   NR MDE1824839.1 2250274 g20152 i0 34.6 0.818181818181818 78 44 80.8 2 250 20 224 295 MDE1824839.1 laminin G domain-containing protein [Candidatus Micrarchaeota archaeon] diamond 234 44.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
31324642 31324642 PRJNA489308_P_NODE_19455_length_289_cov_1.972222_g19379_i0 PRJNA489308 19455 289 1.972222 5.69972158 Archaea 2157 Archaea Archaea 46.6 0.00266   NR MFH2101432.1 2250274 g19379 i0 36.3 3.72664359861592 91 54 93.4 2 18 287 308 395 MFH2101432.1 translation elongation factor EF-1 subunit alpha [Candidatus Micrarchaeota archaeon] diamond 1077 46.6 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;