RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA489308" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA489308 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8103392 8103392 PRJNA489308_P_NODE_37587_length_242_cov_1.822485_g37511_i0 PRJNA489308 37587 242 1.822485 4.4104137 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 159 2.8699999999999998e-43   NR MBC7498086.1 2044595 g37511 i0 98.8 0.991735537190083 80 1 99.2 0 241 2 396 475 MBC7498086.1 DNA-directed RNA polymerase subunit beta' [Candidatus Altimarinota bacterium] diamond 240 159 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28276385 28276385 PRJNA489308_P_NODE_7206_length_403_cov_0.933333_g7130_i0 PRJNA489308 7206 403 0.933333 3.76133199 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 107 4.64e-24   NR NRH20551.1 2044595 g7130 i0 45 0.975186104218362 131 69 97.5 1 1 393 240 367 NRH20551.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 393 107 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29570919 29570919 PRJNA489308_P_NODE_24610_length_269_cov_1.964286_g24534_i0 PRJNA489308 24610 269 1.964286 5.28392934 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 60.8 6.79e-9   NR MBP7670840.1 2044595 g24534 i0 41.3 0.836431226765799 75 43 83.6 1 43 267 8 81 MBP7670840.1 aquaporin [Candidatus Altimarinota bacterium] diamond 225 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30392759 30392759 PRJNA489308_P_NODE_2513_length_617_cov_6.795956_g2437_i0 PRJNA489308 2513 617 6.795956 41.93104852 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 295 1.02e-98   NR MBX9809765.1 2044595 g2437 i0 83.2 0.957860615883306 197 31 95.3 2 589 2 12 207 MBX9809765.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 591 295 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;