RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA489308", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA489308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27613617 27613617 PRJNA489308_P_NODE_31904_length_249_cov_3.278409_g31828_i0 PRJNA489308 31904 249 3.278409 8.16323841 Synergistes sp. 2774297 Bacteria Bacteria 64.7 7.23e-10   NR MCF0248145.1 2774297 g31828 i0 48.4 2.19277108433735 64 29 72.3 1 180 1 2 65 MCF0248145.1 GTPase domain-containing protein [Synergistes sp.] diamond 546 64.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Synergistes Synergistes sp.
32162987 32162987 PRJNA489308_P_NODE_998_length_897_cov_2.819175_g939_i0 PRJNA489308 998 897 2.819175 25.28799975 Synergistales bacterium 2268201 Bacteria Bacteria 77.8 2.84e-13   NR GHS94377.1 2268201 g939 i0 37.8 0.451505016722408 135 76 44.1 4 496 891 34 163 GHS94377.1 hypothetical protein AGMMS50276_06900 [Synergistales bacterium] diamond 405 77.8 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;