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contig_metadata

17 rows where bioproject = "PRJNA489308", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 17 ✖

tax_kingdom 1

  • Pseudomonadati · 17 ✖

bioproject 1

  • PRJNA489308 · 17 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15752858 15752858 PRJNA489308_P_NODE_26433_length_263_cov_1.621053_g26357_i0 PRJNA489308 26433 263 1.621053 4.26336939 Pseudomonadati 3379134 Bacteria Bacteria 85.9 6.27e-18   NR WP_092214393.1 419481 g26357 i0 65 16.5171102661597 60 19 66.2 1 3 176 214 273 WP_092214393.1 50S ribosomal protein L2 [Desulfoluna spongiiphila] diamond 4344 86.3 0.995365005793743 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfolunaceae Desulfoluna Desulfoluna spongiiphila
26601234 26601234 PRJNA489308_P_NODE_12861_length_329_cov_1.148438_g12785_i0 PRJNA489308 12861 329 1.148438 3.77836102 Desulfobacterales bacterium 2044940 Bacteria Bacteria 115 2.7000000000000003e-28   NR UCF95232.1 2044940 g12785 i0 54.4 7.44984802431611 103 42 93.9 1 312 4 266 363 UCF95232.1 MAG: DSD1 family PLP-dependent enzyme [Desulfobacterales bacterium] diamond 2451 115 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
27266079 27266079 PRJNA489308_P_NODE_7263_length_401_cov_3.347561_g7187_i0 PRJNA489308 7263 401 3.347561 13.42371961 Desulfobacterales bacterium 2044940 Bacteria Bacteria 51.6 2.6e-5   NR MEJ2102355.1 2044940 g7187 i0 38.9 0.673316708229426 90 48 67.3 2 397 128 4 86 MEJ2102355.1 DUF86 domain-containing protein [Desulfobacterales bacterium] diamond 270 51.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
27313825 27313825 PRJNA489308_P_NODE_40823_length_226_cov_2.888889_g40747_i0 PRJNA489308 40823 226 2.888889 6.52888914 Bacteria 2 Bacteria Bacteria 50.1 6.96e-5   NR RPI74175.1 2049433 g40747 i0 41.2 2.5353982300885 68 35 90.3 2 206 3 119 181 RPI74175.1 MAG: TraB/GumN family protein, partial [Desulfobacteraceae bacterium] diamond 573 50.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
27692885 27692885 PRJNA489308_P_NODE_2604_length_609_cov_1.792910_g2528_i0 PRJNA489308 2604 609 1.79291 10.9188219 Pseudomonadati 3379134 Bacteria Bacteria 114 1.25e-25   NR WP_015947357.1 218208 g2528 i0 36.8 2.97536945812808 201 99 98 9 598 2 261 435 WP_015947357.1 thrombospondin type-1 domain-containing protein [Desulfatibacillum aliphaticivorans] diamond 1812 114 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfatibacillaceae Desulfatibacillum Desulfatibacillum aliphaticivorans
27771514 27771514 PRJNA489308_P_NODE_4984_length_469_cov_2.515152_g4908_i0 PRJNA489308 4984 469 2.515152 11.79606288 Geotalea uraniireducens 351604 Bacteria Bacteria 132 2.3999999999999999e-32   NR WP_011936964.1 351604 g4908 i0 54.4 2.31556503198294 136 50 87 4 408 1 482 605 WP_011936964.1 5-histidylcysteine sulfoxide synthase [Geotalea uraniireducens] diamond 1086 132 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geotalea Geotalea uraniireducens
28118506 28118506 PRJNA489308_P_NODE_12565_length_331_cov_1.244186_g12489_i0 PRJNA489308 12565 331 1.244186 4.11825566 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 45.1 0.0137   NR MEW6376070.1 2202153 g12489 i0 70 0.181268882175227 20 6 18.1 0 255 314 13 32 MEW6376070.1 SurA N-terminal domain-containing protein [Thermodesulfobacteriota bacterium] diamond 60 45.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29507811 29507811 PRJNA489308_P_NODE_37770_length_242_cov_1.218935_g37694_i0 PRJNA489308 37770 242 1.218935 2.9498227 Candidatus Magnetomorum sp. HK-1 1509431 Bacteria Bacteria 73.2 7.07e-13   NR KPA11627.1 1509431 g37694 i0 49.4 1.74793388429752 77 33 95.5 2 11 241 759 829 KPA11627.1 multi-sensor hybrid histidine kinase [Candidatus Magnetomorum sp. HK-1] diamond 423 73.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Candidatus Magnetomoraceae Candidatus Magnetomorum Candidatus Magnetomorum sp. HK-1
29523953 29523953 PRJNA489308_P_NODE_13550_length_323_cov_2.348000_g13474_i0 PRJNA489308 13550 323 2.348 7.58404 Pseudomonadati 3379134 Bacteria Bacteria 125 6.3e-32   NR WP_367360148.1 48412 g13474 i0 51.4 4.56037151702786 105 50 97.5 1 318 4 171 274 WP_367360148.1 hypothetical protein [Syntrophus sp. (in: bacteria)] diamond 1473 125 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae Syntrophus Syntrophus sp. (in: bacteria)
29839652 29839652 PRJNA489308_P_NODE_6051_length_433_cov_1.669444_g5975_i0 PRJNA489308 6051 433 1.669444 7.22869252 Desulfofustis 51194 Bacteria Bacteria 87.8 1.19e-17   NR MBL0379062.1 1385624 g5975 i0 53.6 1.16397228637413 84 38 57.5 1 323 75 211 294 MBL0379062.1 ADP-ribosylglycohydrolase family protein [Desulfofustis sp. PB-SRB1] diamond 504 87.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfofustis Desulfofustis sp. PB-SRB1
30739832 30739832 PRJNA489308_P_NODE_1654_length_729_cov_20.647866_g1580_i0 PRJNA489308 1654 729 20.647866 150.52294314 Desulfobacterales bacterium HSG2 3055596 Bacteria Bacteria 83.6 1.89e-14   NR MDM8549572.1 3055596 g1580 i0 31.9 0.748971193415638 182 107 69.1 5 174 677 33 211 MDM8549572.1 peptidase inhibitor family I36 protein [Desulfobacterales bacterium HSG2] diamond 546 83.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium HSG2
30866180 30866180 PRJNA489308_P_NODE_4514_length_487_cov_2.855072_g4438_i0 PRJNA489308 4514 487 2.855072 13.904200640000001 Desulfobacterales bacterium 2044940 Bacteria Bacteria 46.6 0.00268   NR MDX2441450.1 2044940 g4438 i0 48.9 0.277207392197125 45 23 27.7 0 484 350 62 106 MDX2441450.1 spermidine synthase [Desulfobacterales bacterium] diamond 135 46.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31118725 31118725 PRJNA489308_P_NODE_1275_length_809_cov_24.626359_g1211_i0 PRJNA489308 1275 809 24.626359 199.22724431 Desulfobacterales bacterium HSG2 3055596 Bacteria Bacteria 81.6 1.52e-13   NR MDM8549572.1 3055596 g1211 i0 31.9 0.674907292954265 182 107 62.3 5 174 677 33 211 MDM8549572.1 peptidase inhibitor family I36 protein [Desulfobacterales bacterium HSG2] diamond 546 81.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium HSG2
31340305 31340305 PRJNA489308_P_NODE_22916_length_275_cov_2.039604_g22840_i0 PRJNA489308 22916 275 2.039604 5.608911 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 47.4 6.29e-4   NR MFB3885833.1 2202153 g22840 i0 45.8 1.0581818181818201 48 25 51.3 1 12 152 124 171 MFB3885833.1 DUF4833 domain-containing protein [Thermodesulfobacteriota bacterium] diamond 291 47.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31466992 31466992 PRJNA489308_P_NODE_1276_length_809_cov_22.652174_g1212_i0 PRJNA489308 1276 809 22.652174 183.25608766 Desulfobacterales bacterium HSG2 3055596 Bacteria Bacteria 81.6 1.52e-13   NR MDM8549572.1 3055596 g1212 i0 32.4 1.35352286773795 182 106 62.3 5 636 133 33 211 MDM8549572.1 peptidase inhibitor family I36 protein [Desulfobacterales bacterium HSG2] diamond 1095 81.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium HSG2
31672585 31672585 PRJNA489308_P_NODE_36257_length_244_cov_0.900585_g36181_i0 PRJNA489308 36257 244 0.900585 2.1974274 Nitrospinota/Tectimicrobiota group 1802340 Bacteria Bacteria 104 5.39e-25   NR HEA69194.1 2044940 g36181 i0 65.8 6.77459016393443 79 27 97.1 0 241 5 123 201 HEA69194.1 ribokinase [Desulfobacterales bacterium] diamond 1653 104 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31846291 31846291 PRJNA489308_P_NODE_26817_length_262_cov_1.544974_g26741_i0 PRJNA489308 26817 262 1.544974 4.04783188 Desulfobacterales bacterium 2044940 Bacteria Bacteria 53.5 6.98e-6   NR MCP3927172.1 2044940 g26741 i0 57.1 1.30534351145038 35 15 40.1 0 78 182 224 258 MCP3927172.1 DUF1963 domain-containing protein [Desulfobacterales bacterium] diamond 342 53.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;