RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA489308", tax_kingdom = "Promethearchaeati" and tax_phylum = "Candidatus Thorarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 2 ✖

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA489308 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28024022 28024022 PRJNA489308_P_NODE_5545_length_449_cov_2.037234_g5469_i0 PRJNA489308 5545 449 2.037234 9.14718066 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 133 5.57e-34   NR NHI87933.1 2053491 g5469 i0 47.9 3.87527839643653 146 76 97.6 0 1 438 261 406 NHI87933.1 threonine ammonia-lyase [Candidatus Thorarchaeota archaeon] diamond 1740 133 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
28497680 28497680 PRJNA489308_P_NODE_41247_length_198_cov_4.048000_g41171_i0 PRJNA489308 41247 198 4.048 8.01504 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 52.8 2.78e-6   NR MDH4213144.1 2053491 g41171 i0 54.5 3.03030303030303 44 19 66.7 1 3 134 136 178 MDH4213144.1 50S ribosomal protein L6 [Candidatus Thorarchaeota archaeon] diamond 600 52.8 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;