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contig_metadata

20 rows where bioproject = "PRJNA489308", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 20 ✖

bioproject 1

  • PRJNA489308 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1724915 1724915 PRJNA489308_P_NODE_27982_length_258_cov_2.167568_g27906_i0 PRJNA489308 27982 258 2.167568 5.59232544 Verrucomicrobiales 48461 Bacteria Bacteria 87.4 4.38e-18   NR WP_379711123.1 1048331 g27906 i0 65.6 4.6046511627907 64 22 74.4 0 2 193 88 151 WP_379711123.1 HAD-IB family phosphatase [Haloferula chungangensis] diamond 1188 88.2 0.99092970521542 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Haloferula Haloferula chungangensis
9377915 9377915 PRJNA489308_P_NODE_16248_length_306_cov_0.991416_g16172_i0 PRJNA489308 16248 306 0.991416 3.03373296 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 566 8.239999999999998e-157   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g16172 i0 100 277.408496732026 306 0 100 0 1 306 2335 2030 Luteolibacter sp. SL250 chromosome blastn 84887 566 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
11928989 11928989 PRJNA489308_P_NODE_5810_length_440_cov_3.114441_g5734_i0 PRJNA489308 5810 440 3.114441 13.7035404 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 212 1.6200000000000003e-64   NR MEP6698099.1 2026799 g5734 i0 72.6 36.825 146 40 99.5 0 2 439 225 370 MEP6698099.1 ADP-forming succinate--CoA ligase subunit beta [Verrucomicrobiota bacterium] diamond 16203 212 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
20851787 20851787 PRJNA489308_P_NODE_20317_length_285_cov_2.905660_g20241_i0 PRJNA489308 20317 285 2.90566 8.281131 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 136 5.96e-36   NR MBV9878042.1 2026799 g20241 i0 73.6 0.957894736842105 91 24 95.8 0 6 278 314 404 MBV9878042.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Verrucomicrobiota bacterium] diamond 273 136 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
22126799 22126799 PRJNA489308_P_NODE_7918_length_389_cov_1.357595_g7842_i0 PRJNA489308 7918 389 1.357595 5.28104455 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 691 0   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g7842 i0 98.715 287.030848329049 389 5 100 0 1 389 1023 635 Luteolibacter sp. SL250 chromosome blastn 111655 691 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
23402432 23402432 PRJNA489308_P_NODE_21359_length_281_cov_2.403846_g21283_i0 PRJNA489308 21359 281 2.403846 6.75480726 Luteolibacter sp. SL250 2995170 Bacteria Bacteria 497 2.77e-136   NTclustered gi|2381117106|gb|CP113054.1| 2995170 g21283 i0 98.577 275.693950177936 281 4 100 0 1 281 4716431 4716711 Luteolibacter sp. SL250 chromosome blastn 77470 497 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. SL250
26727761 26727761 PRJNA489308_P_NODE_40941_length_226_cov_2.013072_g40865_i0 PRJNA489308 40941 226 2.013072 4.54954272 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 121 3.53e-31   NR RYD81270.1 2026800 g40865 i0 72.6 0.969026548672566 73 20 96.9 0 3 221 220 292 RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] diamond 219 121 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
27076345 27076345 PRJNA489308_P_NODE_25902_length_265_cov_1.203125_g25826_i0 PRJNA489308 25902 265 1.203125 3.18828125 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 93.2 6.27e-20   NR HEX4644544.1 2499141 g25826 i0 54.5 2.98867924528302 88 37 99.6 1 264 1 137 221 HEX4644544.1 PhoPQ-activated protein PqaA family protein [Verrucomicrobiia bacterium] diamond 792 93.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27471724 27471724 PRJNA489308_P_NODE_10523_length_350_cov_2.194946_g10447_i0 PRJNA489308 10523 350 2.194946 7.682311 Termitidicoccus 3126963 Bacteria Bacteria 73.2 2.75e-12   NR WP_334319245.1 1184151 g10447 i0 73.9 4.68857142857143 46 12 39.4 0 346 209 779 824 WP_334319245.1 FAD-dependent oxidoreductase [Termitidicoccus mucosus] diamond 1641 73.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Termitidicoccus Termitidicoccus mucosus
27550199 27550199 PRJNA489308_P_NODE_8424_length_379_cov_1.542484_g8348_i0 PRJNA489308 8424 379 1.542484 5.84601436 Verrucomicrobiota bacterium JB025 3064554 Bacteria Bacteria 76.6 1.21e-13   NR MDP0505279.1 3064554 g8348 i0 58.1 0.490765171503958 62 24 49.1 1 379 194 261 320 MDP0505279.1 aldo/keto reductase [Verrucomicrobiota bacterium JB025] diamond 186 76.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium JB025
28466095 28466095 PRJNA489308_P_NODE_11906_length_337_cov_1.090909_g11830_i0 PRJNA489308 11906 337 1.090909 3.67636333 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 51.2 1.21e-4   NR MCI0537439.1 2026801 g11830 i0 32.1 0.970326409495549 109 59 97 4 1 327 896 989 MCI0537439.1 protein kinase [Verrucomicrobiales bacterium] diamond 327 51.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
29444527 29444527 PRJNA489308_P_NODE_6190_length_429_cov_1.730337_g6114_i0 PRJNA489308 6190 429 1.730337 7.42314573 Chthoniobacter sp. 2510640 Bacteria Bacteria 53.1 6.46e-5   NR MDR3401413.1 2510640 g6114 i0 42.3 0.496503496503497 71 27 49.7 2 212 424 676 732 MDR3401413.1 RNase H-like domain-containing protein [Chthoniobacter sp.] diamond 213 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
29570913 29570913 PRJNA489308_P_NODE_19250_length_290_cov_1.852535_g19174_i0 PRJNA489308 19250 290 1.852535 5.3723515 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 105 8.05e-24   NR MBS0645922.1 2026799 g19174 i0 57.8 1.90344827586207 90 38 93.1 0 14 283 776 865 MBS0645922.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 552 105 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31672587 31672587 PRJNA489308_P_NODE_5077_length_466_cov_1.562341_g5001_i0 PRJNA489308 5077 466 1.562341 7.28050906 Pseudomonadati 3379134 Bacteria Bacteria 87.4 1e-16   NR MEM8868505.1 2026799 g5001 i0 38.4 4.78326180257511 125 74 79.2 2 371 3 2 125 MEM8868505.1 UTP--glucose-1-phosphate uridylyltransferase [Verrucomicrobiota bacterium] diamond 2229 87.8 0.995444191343964 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31751379 31751379 PRJNA489308_P_NODE_15097_length_313_cov_1.283333_g15021_i0 PRJNA489308 15097 313 1.283333 4.01683229 Chthoniobacter flavus 191863 Bacteria Bacteria 47.4 0.00193   NR WP_006980619.1 191863 g15021 i0 31.3 0.766773162939297 80 44 76.7 1 302 63 1 69 WP_006980619.1 AAA family ATPase [Chthoniobacter flavus] diamond 240 47.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter flavus
31751403 31751403 PRJNA489308_P_NODE_40337_length_230_cov_2.681529_g40261_i0 PRJNA489308 40337 230 2.681529 6.1675167 Luteolibacter sp. Populi 3230487 Bacteria Bacteria 53.9 3.25e-6   NR WP_367873588.1 3230487 g40261 i0 46.7 0.782608695652174 60 30 75.7 1 189 16 215 274 WP_367873588.1 choice-of-anchor A family protein [Luteolibacter sp. Populi] diamond 180 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. Populi
32036227 32036227 PRJNA489308_P_NODE_8998_length_369_cov_3.912162_g8922_i0 PRJNA489308 8998 369 3.912162 14.43587778 Chthoniobacter sp. 2510640 Bacteria Bacteria 80.1 1.13e-14   NR MDR3405335.1 2510640 g8922 i0 84.4 0.365853658536585 45 7 36.6 0 3 137 420 464 MDR3405335.1 translation elongation factor EF1A family protein [Chthoniobacter sp.] diamond 135 80.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
32162958 32162958 PRJNA489308_P_NODE_15018_length_313_cov_2.029167_g14942_i0 PRJNA489308 15018 313 2.029167 6.35129271 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 73.2 1.78e-12   NR MBI2925201.1 2026799 g14942 i0 43.6 0.968051118210863 101 45 94.9 5 12 308 2149 2239 MBI2925201.1 carboxypeptidase regulatory-like domain-containing protein [Verrucomicrobiota bacterium] diamond 303 73.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32368918 32368918 PRJNA489308_P_NODE_259_length_1395_cov_4.189107_g227_i0 PRJNA489308 259 1395 4.189107 58.43804265 Bacteria 2 Bacteria Bacteria 180 5.81e-47   NR MDA1065816.1 2026799 g227 i0 32.1 3.97204301075269 368 214 78.5 12 1382 288 163 497 MDA1065816.1 bifunctional metallophosphatase/5'-nucleotidase [Verrucomicrobiota bacterium] diamond 5541 181 0.994475138121547 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32463739 32463739 PRJNA489308_P_NODE_12199_length_334_cov_1.685824_g12123_i0 PRJNA489308 12199 334 1.685824 5.63065216 Bacteria 2 Bacteria Bacteria 81.3 1.47e-16   NR HYT56663.1 2499141 g12123 i0 72 2.2185628742515 50 14 44.9 0 185 334 2 51 HYT56663.1 ATP-dependent protease subunit HslV [Verrucomicrobiia bacterium] diamond 741 81.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;