RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA489308", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA489308 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26855087 26855087 PRJNA489308_P_NODE_1841_length_699_cov_11.400958_g1766_i0 PRJNA489308 1841 699 11.400958 79.69269642 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 100 2.98e-23   NR UCE02090.1 2053570 g1766 i0 70.6 0.824034334763948 68 20 29.2 0 574 371 24 91 UCE02090.1 MAG: cold-shock protein [Candidatus Latescibacterota bacterium] diamond 576 100 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32226235 32226235 PRJNA489308_P_NODE_21438_length_281_cov_1.639423_g21362_i0 PRJNA489308 21438 281 1.639423 4.60677863 Latescibacteria bacterium DG_63 1703781 Bacteria Bacteria 44.7 0.0124   NR KPJ60555.1 1703781 g21362 i0 35.4 0.875444839857651 82 50 85.4 3 3 242 721 801 KPJ60555.1 MAG: Clp protease ClpX [Latescibacteria bacterium DG_63] diamond 246 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Latescibacteria bacterium DG_63

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;