RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA489308", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA489308 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2373593 2373593 PRJNA489308_P_NODE_4322_length_496_cov_1.319149_g4246_i0 PRJNA489308 4322 496 1.319149 6.54297904 Candidatus Aminicenantaceae bacterium 3104267 Bacteria Bacteria 121 1.11e-31   NR MEE8605158.1 3104267 g4246 i0 74.7 9.38104838709677 75 19 45.4 0 3 227 76 150 MEE8605158.1 EF-Tu/IF-2/RF-3 family GTPase [Candidatus Aminicenantaceae bacterium] diamond 4653 121 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales Candidatus Aminicenantaceae   Candidatus Aminicenantaceae bacterium
27044774 27044774 PRJNA489308_P_NODE_4342_length_495_cov_1.921801_g4266_i0 PRJNA489308 4342 495 1.921801 9.51291495 Candidatus Aminicenantes bacterium RBG_13_62_12 1797269 Bacteria Bacteria 55.1 2.39e-5   NR OGD12086.1 1797269 g4266 i0 43.9 0.496969696969697 82 27 49.1 2 491 249 655 718 OGD12086.1 MAG: hypothetical protein A2Y86_09220 [Candidatus Aminicenantes bacterium RBG_13_62_12] diamond 246 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_13_62_12
29981596 29981596 PRJNA489308_P_NODE_37191_length_243_cov_0.905882_g37115_i0 PRJNA489308 37191 243 0.905882 2.20129326 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 75.5 5.98e-14   NR HHF52155.1 2052149 g37115 i0 57.1 2.77777777777778 70 13 86.4 1 32 241 170 222 HHF52155.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 675 75.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;