RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA488043", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA488043 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28497649 28497649 PRJNA488043_P_NODE_3427_length_783_cov_2.578249_g1558_i1 PRJNA488043 3427 783 2.578249 20.18768967 Nanobdellota archaeon 2026764 Archaea Archaea 80.1 4.22e-14   NR MCA9497338.1 2026764 g1558 i1 45.6 0.344827586206897 90 46 33.7 2 518 781 10 98 MCA9497338.1 HK97 family phage prohead protease [Nanoarchaeota archaeon] diamond 270 80.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29728627 29728627 PRJNA488043_P_NODE_3450_length_779_cov_2.849333_g1558_i2 PRJNA488043 3450 779 2.849333 22.19630407 Nanobdellota archaeon 2026764 Archaea Archaea 80.1 4.14e-14   NR MCA9497338.1 2026764 g1558 i2 45.6 0.346598202824134 90 46 33.9 2 266 3 10 98 MCA9497338.1 HK97 family phage prohead protease [Nanoarchaeota archaeon] diamond 270 80.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
30013266 30013266 PRJNA488043_P_NODE_3011_length_853_cov_2.406553_g1558_i0 PRJNA488043 3011 853 2.406553 20.52789709 Nanobdellota archaeon 2026764 Archaea Archaea 80.1 6.27e-14   NR MCA9497338.1 2026764 g1558 i0 45.6 0.316529894490035 90 46 30.9 2 588 851 10 98 MCA9497338.1 HK97 family phage prohead protease [Nanoarchaeota archaeon] diamond 270 80.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;