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contig_metadata

17 rows where bioproject = "PRJNA488043", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA488043 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1724604 1724604 PRJNA488043_P_NODE_20102_length_170_cov_126.496454_g17860_i0 PRJNA488043 20102 170 126.496454 215.0439718 Tetrahymena acanthophora 2704174 SAR_Eukaryotes SAR_Eukaryotes 230 6.119999999999999e-56   NTclustered gi|2082965250|gb|MZ827090.1| 2704174 g17860 i0 96.403 81.6588235294118 139 5 82 0 25 163 129 267 Tetrahymena acanthophora isolate NB176 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13882 230 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena acanthophora
2373342 2373342 PRJNA488043_P_NODE_12742_length_266_cov_8.071730_g10501_i0 PRJNA488043 12742 266 8.07173 21.4708018 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 446 9.549999999999999e-121   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10501 i0 96.981 13.109022556391 265 8 99 0 1 265 1516 1780 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 3487 446 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
3000668 3000668 PRJNA488043_P_NODE_22383_length_151_cov_2.647541_g20141_i0 PRJNA488043 22383 151 2.647541 3.99778691 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 241 2.4500000000000008e-59   NTclustered gi|1837628855|gb|MN158348.1| 5909 g20141 i0 95.395 9.93377483443709 152 6 100 1 1 151 4721 4570 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1500 241 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
7475904 7475904 PRJNA488043_P_NODE_18106_length_190_cov_6.751553_g15864_i0 PRJNA488043 18106 190 6.751553 12.8279507 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 351 1.4399999999999997e-92   NTclustered gi|347439265|gb|JN111978.1| 151077 g15864 i0 100 72.0421052631579 190 0 100 0 1 190 761 572 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 13688 351 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8750984 8750984 PRJNA488043_P_NODE_7287_length_450_cov_13.926366_g5148_i0 PRJNA488043 7287 450 13.926366 62.668647 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 630 4.4e-176   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5148 i0 94.621 92.3155555555556 409 19 91 3 42 450 406 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 41542 630 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8751019 8751019 PRJNA488043_S_NODE_827_length_207_cov_3.016854_g816_i0 PRJNA488043 827 207 3.016854 6.24488778 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 180 7.96e-41   NTclustered gi|822093032|gb|KP313338.1| 5911 g816 i0 82.938 91.9371980676328 211 24 99 10 1 205 82 286 Tetrahymena thermophila isolate 19147-1 translation elongation factor 1 subunit alpha (TEF1a) gene, partial cds; macronuclear blastn 19031 180 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
12577027 12577027 PRJNA488043_P_NODE_9050_length_372_cov_13.615160_g6826_i0 PRJNA488043 9050 372 13.61516 50.6483952 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 244 5.44e-60   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6826 i0 97.222 1.16129032258065 144 4 39 0 229 372 3082 2939 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 432 244 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
13203662 13203662 PRJNA488043_S_NODE_1291_length_170_cov_4.680851_g1280_i0 PRJNA488043 1291 170 4.680851 7.9574467 Tetrahymena foissneri 2821798 SAR_Eukaryotes SAR_Eukaryotes 261 2.1700000000000002e-65   NTclustered gi|2019294631|gb|MW827185.1| 2821798 g1280 i0 95.21 78.9647058823529 167 5 96 2 7 170 437 271 Tetrahymena foissneri isolate ST 1 AV large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 13424 261 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena foissneri
14478598 14478598 PRJNA488043_S_NODE_1332_length_167_cov_4.123188_g1321_i0 PRJNA488043 1332 167 4.123188 6.88572396 Tetrahymena sp. FN-2012 1217406 SAR_Eukaryotes SAR_Eukaryotes 307 2.71e-79   NTclustered gi|400269896|gb|JX271898.1| 1217406 g1321 i0 100 99.2874251497006 166 0 99 0 1 166 389 554 Tetrahymena sp. FN-2012 strain HFCC700 28S large subunit ribosomal RNA gene, partial sequence blastn 16581 307 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena sp. FN-2012
16400427 16400427 PRJNA488043_P_NODE_13093_length_259_cov_4.169565_g10852_i0 PRJNA488043 13093 259 4.169565 10.79917335 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 477 3.2799999999999986e-130   NTclustered gi|966204127|emb|LN870015.1| 1683281 g10852 i0 100 99.6177606177606 258 0 99 0 2 259 861 604 Oligohymenophorea sp. bLPN1 partial 18S rRNA gene, isolate bLPN1 Oligohymenophorean blastn 25801 477 1 Eukaryota Sar   Ciliophora Oligohymenophorea       Oligohymenophorea sp. bLPN1
16400469 16400469 PRJNA488043_P_NODE_17473_length_197_cov_4.994048_g15231_i0 PRJNA488043 17473 197 4.994048 9.83827456 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 357 3.23e-94   NTclustered gi|966204127|emb|LN870015.1| 1683281 g15231 i0 99.49 99.492385786802 196 1 99 0 2 197 302 107 Oligohymenophorea sp. bLPN1 partial 18S rRNA gene, isolate bLPN1 Oligohymenophorean blastn 19600 357 1 Eukaryota Sar   Ciliophora Oligohymenophorea       Oligohymenophorea sp. bLPN1
16400511 16400511 PRJNA488043_P_NODE_21473_length_158_cov_43.100775_g19231_i0 PRJNA488043 21473 158 43.100775 68.0992245 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 292 7.07e-75   NTclustered gi|158147318|gb|EU047813.1| 151077 g19231 i0 100 75.6582278481013 158 0 100 0 1 158 239 82 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 11954 292 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19575566 19575566 PRJNA488043_P_NODE_13036_length_260_cov_7.567100_g10795_i0 PRJNA488043 13036 260 7.5671 19.67446 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 481 2.55e-131   NTclustered gi|1202135013|gb|KY476314.1| 151077 g10795 i0 100 100.546153846154 260 0 100 0 1 260 335 76 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 26142 481 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19575598 19575598 PRJNA488043_P_NODE_15856_length_215_cov_22.666667_g13614_i0 PRJNA488043 15856 215 22.666667 48.73333405 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 381 2.1299999999999996e-101   NTclustered gi|10782|emb|X54004.1| 5908 g13614 i0 98.605 7.62325581395349 215 3 100 0 1 215 3121 3335 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 1639 381 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
22126253 22126253 PRJNA488043_P_NODE_12918_length_262_cov_21.158798_g10677_i0 PRJNA488043 12918 262 21.158798 55.43605076 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 449 7.26e-122   NTclustered gi|1837628855|gb|MN158348.1| 5909 g10677 i0 97.701 92.5267175572519 261 6 99 0 2 262 4458 4198 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 24242 449 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
23402228 23402228 PRJNA488043_P_NODE_3099_length_835_cov_8.234491_g916_i1 PRJNA488043 3099 835 8.234491 68.75799985 Tetrahymena acanthophora 2704174 SAR_Eukaryotes SAR_Eukaryotes 632 2.359999999999999e-176   NTclustered gi|2082965250|gb|MZ827090.1| 2704174 g916 i1 99.145 50.474251497006 351 3 71 0 485 835 869 519 Tetrahymena acanthophora isolate NB176 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 42146 632 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena acanthophora
27897455 27897455 PRJNA488043_P_NODE_22225_length_153_cov_1.040323_g19983_i0 PRJNA488043 22225 153 1.040323 1.59169419 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 79 1.55e-15   NR CAG9318302.1 1481888 g19983 i0 83.7 4.25490196078431 43 7 84.3 0 25 153 1 43 CAG9318302.1 unnamed protein product [Blepharisma stoltei] diamond 651 79 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;