RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA488043", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA488043 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30361158 30361158 PRJNA488043_P_NODE_20032_length_171_cov_2.598592_g17790_i0 PRJNA488043 20032 171 2.598592 4.44359232 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 101 1.03e-26   NR HQI77299.1 2053570 g17790 i0 94 0.87719298245614 50 3 87.7 0 152 3 2 51 HQI77299.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 150 101 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30755973 30755973 PRJNA488043_P_NODE_21114_length_161_cov_2.848485_g18872_i0 PRJNA488043 21114 161 2.848485 4.58606085 Pseudomonadati 3379134 Bacteria Bacteria 52.8 2.41e-6   NR OQB37296.1 1852850 g18872 i0 49 4.26708074534162 49 25 91.3 0 3 149 57 105 OQB37296.1 MAG: hypothetical protein BWY06_02435 [Candidatus Latescibacteria bacterium ADurb.Bin168] diamond 687 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacteria bacterium ADurb.Bin168

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;