RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA488043" and tax_clade = "DNA satellites"

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tax_superkingdom 1

tax_clade 1

  • DNA satellites · 2 ✖

bioproject 1

  • PRJNA488043 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29255036 29255036 PRJNA488043_P_NODE_3349_length_797_cov_2.415365_g1795_i0 PRJNA488043 3349 797 2.415365 19.25045905 Pacmanvirus lostcity transpoviron 3377234 Viruses Viruses 50.8 0.00411   NR WNS49366.1 3377234 g1795 i0 29.5 0.357590966122961 95 63 34.6 2 2 277 425 518 WNS49366.1 DEAD-like helicase [Pacmanvirus lostcity transpoviron] diamond 285 50.8 1 Viruses DNA satellites             Pacmanvirus lostcity transpoviron
32574351 32574351 PRJNA488043_P_NODE_4319_length_664_cov_2.464567_g2537_i0 PRJNA488043 4319 664 2.464567 16.36472488 Pacmanvirus lostcity transpoviron 3377234 Viruses Viruses 47.4 0.0319   NR WNS49366.1 3377234 g2537 i0 26.2 0.862951807228916 191 93 71.4 8 5 478 442 617 WNS49366.1 DEAD-like helicase [Pacmanvirus lostcity transpoviron] diamond 573 47.4 1 Viruses DNA satellites             Pacmanvirus lostcity transpoviron

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;