RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA488043", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Woeseibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woeseibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA488043 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29097526 29097526 PRJNA488043_P_NODE_6628_length_488_cov_3.267974_g2898_i1 PRJNA488043 6628 488 3.267974 15.94771312 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 65.1 8.12e-9   NR HNQ31626.1 2026804 g2898 i1 54.5 0.620901639344262 101 24 52.3 3 263 9 470 564 HNQ31626.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 303 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31767478 31767478 PRJNA488043_P_NODE_15617_length_219_cov_2.047368_g13375_i0 PRJNA488043 15617 219 2.047368 4.48373592 Pseudomonadati 3379134 Bacteria Bacteria 51.6 2.11e-5   NR HNQ31626.1 2026804 g13375 i0 41.1 1.82191780821918 73 23 100 1 219 1 475 527 HNQ31626.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 399 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;